Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0138 ATGCTAATTATTGGACTCGGAAATCGAAATAAAATTTACAGGAGTGAACTGAAGAATGCGATTGTAGAAGGAGGAATTCCTTTCAATAGGGCTCATGGGGGAACACATGCCTTTGAATACCCTGATTTGGATCCAAAATTTAACCAAGTTTTCAACACTGCAATGCTGAATCACACTACTATAGTGGCGAAGAAGATTGTTGAGTCCTATAAGGGCTTTGCAAATCTAAAGCAAGTGGTTGATGTCGGTGGTGGTTTAGGGGTCACTCTTCAAATCATCACTTCTACGTACCCTTCAATTAAGGGTATCAACTTCGACTTGCCTTATGTCATTCACAGTGCCCCTCCCTATCCCGGTGTAGAACATGTAGGAGGTGATATGTTTGAGTGTGTTCCAAAAGGAGAAGCTATTTTCATGAAGATTTGA 426 40.85 MLIIGLGNRNKIYRSELKNAIVEGGIPFNRAHGGTHAFEYPDLDPKFNQVFNTAMLNHTTIVAKKIVESYKGFANLKQVVDVGGGLGVTLQIITSTYPSIKGINFDLPYVIHSAPPYPGVEHVGGDMFECVPKGEAIFMKI 141
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4987195 4988979 - Hsped.06g01380.1 Hepe06g0138 571513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0138 141 Pfam O-methyltransferase domain 16 140 IPR001077 GO:0008171(InterPro)
Hepe06g0138 141 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 139 IPR029063 -
Hepe06g0138 141 PANTHER O-METHYLTRANSFERASE 11 141 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Hepe06g0138 141 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 141 IPR016461 GO:0008168(InterPro)
Hepe06g0138 141 Gene3D Vaccinia Virus protein VP39 48 140 IPR029063 -
Hepe06g0138 141 Gene3D - 34 66 IPR036388 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0138 Hepe-Chr6:4987195 Hepe06g0254 Hepe-Chr6:9198598 2.47e-76 dispersed
Hepe06g0137 Hepe-Chr6:4981374 Hepe06g0138 Hepe-Chr6:4987195 2.72e-86 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0138 K13066 - csv:101205290 218.394