Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0141 | ATGGAGATGGAGCAGTACAAGGTTTTGGCTTTGGGTTTCGTCTCTTTGATCTTGCTGCTTCCTCCACTATGGCTCGTTTCTGCTAACATGGAAGGTGATGCTTTGCATAGCCTAAGAACCAGCTTGCAGGATCCTAATAATGTGTTGCAGAGTTGGGATCCCACTCTTGTCAATCCTTGTACATGGTTTCATGTTACCTGCAATAATGATAATAGTGTCATAAGAGTTGATCTTGGAAATGCAGCTTTATCGGGCACACTTGTTCCACAGCTTGGGTTGCTAAAAAATTTGCAGTATCTAGAGCTCTACAGTAATAACATAAGTGGAGTAATTCCTAGCGATCTTGGGAATCTGACCAGTTTGGTGAGCTTAGATCTTTATTTGAACAGTTTTTCGGGTCCGATTCCAGACACATTGGGCAAGCTGTCAAAACTGCGATTCCTCCGGCTGAACAACAACAGCTTATCAGGTCCCATTCCTATGTCATTGACTAATATTTCATCCCTTCAAGTCTTGGATCTTTCGAATAACCATCTCTCAGGCGTGGTTCCAGATAATGGTTCCTTCTCCTTATTCACCCCCATCAGTTTTGCCAACAACTTGGACCTTTGTGGCCCTGTTACTGGACGTCCTTGCCCTGGTTCTCCTCCATTTTCGCCTCCTCCACCCTTTGTCCCACCACCGCCTATATCTTCACCAGGAGGGAATAGTGCAACTGGAGCTATTGCGGGTGGAGTTGCTGCAGGTGCTGCTTTACTTTTTGCAGCTCCAGCAATTGCATTTGCGTGGTGGCGTCGTAGGAAACCCCAAGAAGTTTTCTTTGACGTTCCTGCCGAAGAGGATCCTGAAGTGCATCTGGGACAGCTTAAAAGATTTTCACTGAGAGAACTACAAGTGGCAAGTGATACTTTTAGTAACAAGAACATACTTGGTAGGGGTGGATTTGGCAAAGTCTATAAAGGTCGATTGGCTGACGGTTCTTTAGTAGCCGTAAAAAGACTTAAGGAAGAACGTACGCCTGGTGGTGAGCTGCAATTTCAAACAGAAGTAGAGATGATCAGCATGGCTGTGCATCGGAACCTGCTACGACTACGTGGATTTTGCATGACACCAACTGAACGACTTCTTGTTTACCCCTACATGGCCAATGGAAGTGTTGCGTCTTGCTTAAGAGAACGACCACCATCCCAACCACCTCTTGATTGGAGAACAAGGAAGCGAATTGCGTTGGGATCTGCGAGAGGGCTGTCTTATTTGCATGATCACTGTGATCCAAAGATTATTCATCGTGATGTAAAAGCTGCAAATATTTTGCTGGATGAGGAGTTTGAAGCTGTTGTAGGGGACTTTGGGTTGGCCAAACTTATGGATTACAAAGATACTCATGTCACCACCGCGGTGCGTGGTACGATTGGACATATAGCTCCTGAGTACCTTTCCACCGGGAAATCTTCTGAGAAAACAGATGTTTTCGGGTACGGTATCATGCTTCTAGAGCTGATCACTGGACAAAGGGCTTTCGATTTGGCTCGACTTGCTAATGATGATGATGTCATGCTACTTGATTGGGTAAAAGGACTCCTGAAAGAGAAGAAGCTAGAAATGCTGGTTGATCCTGATCTTCAGAACAATTATATAGAATCCGAGGTAGAACAGTTGATTCAGGTTGCTCTGCTCTGCACACAAGGCTCCCCGATGGACAGACCGAAGATGTCCGAGGTGGTGAGAATGCTCGAAGGTGACGGTTTGGCAGAAAGATGGGACGAGTGGCAAAAGGTGGAAATCCTTCGGCAAGAAATCGATCTATCGCCTCATCCAAATTCCGATTGGATTGTCGATTCCACTGAAAATCTACACGCAGTTGAGCTTTCTGGTCCAAGATGA | 1884 | 45.65 | MEMEQYKVLALGFVSLILLLPPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYLELYSNNISGVIPSDLGNLTSLVSLDLYLNSFSGPIPDTLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGRPCPGSPPFSPPPPFVPPPPISSPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEVFFDVPAEEDPEVHLGQLKRFSLRELQVASDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWRTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYIESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEILRQEIDLSPHPNSDWIVDSTENLHAVELSGPR | 627 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5131041 | 5140883 | + | Hsped.06g01410.1 | Hepe06g0141 | 571516 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0141 | 627 | Pfam | Leucine rich repeat N-terminal domain | 29 | 68 | IPR013210 | - | |
Hepe06g0141 | 627 | Gene3D | Ribonuclease Inhibitor | 27 | 214 | IPR032675 | - | |
Hepe06g0141 | 627 | Pfam | Leucine Rich Repeat | 168 | 186 | IPR001611 | GO:0005515(InterPro) | |
Hepe06g0141 | 627 | Pfam | Leucine Rich Repeat | 144 | 165 | IPR001611 | GO:0005515(InterPro) | |
Hepe06g0141 | 627 | Pfam | Leucine Rich Repeat | 120 | 142 | IPR001611 | GO:0005515(InterPro) | |
Hepe06g0141 | 627 | Pfam | Leucine Rich Repeat | 96 | 118 | IPR001611 | GO:0005515(InterPro) | |
Hepe06g0141 | 627 | Gene3D | Transferase(Phosphotransferase) domain 1 | 381 | 598 | - | - | |
Hepe06g0141 | 627 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 13 | 627 | - | - | |
Hepe06g0141 | 627 | Gene3D | Phosphorylase Kinase; domain 1 | 273 | 380 | - | - | |
Hepe06g0141 | 627 | FunFam | Somatic embryogenesis receptor kinase 1 | 273 | 380 | - | - | |
Hepe06g0141 | 627 | SUPERFAMILY | Protein kinase-like (PK-like) | 283 | 579 | IPR011009 | - | |
Hepe06g0141 | 627 | SMART | serkin_6 | 304 | 578 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g0141 | 627 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 381 | 598 | - | - | |
Hepe06g0141 | 627 | ProSitePatterns | Protein kinases ATP-binding region signature. | 310 | 332 | IPR017441 | GO:0005524(InterPro) | |
Hepe06g0141 | 627 | Pfam | Protein tyrosine and serine/threonine kinase | 307 | 578 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0141 | 627 | SUPERFAMILY | L domain-like | 32 | 195 | - | - | |
Hepe06g0141 | 627 | ProSiteProfiles | Protein kinase domain profile. | 304 | 591 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g0141 | 627 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 427 | 439 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0141 | 627 | FunFam | Somatic embryogenesis receptor kinase 1 | 27 | 214 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0770 | Hepe-Chr2:8495865 | Hepe06g0141 | Hepe-Chr6:5131041 | 5.33e-242 | dispersed | |
Hepe06g0141 | Hepe-Chr6:5131041 | Hepe07g0324 | Hepe-Chr7:3259241 | 1.55e-273 | dispersed | |
Hepe03g1159 | Hepe-Chr3:65129447 | Hepe06g0141 | Hepe-Chr6:5131041 | 2.36e-34 | transposed | |
Hepe07g0661 | Hepe-Chr7:7598954 | Hepe06g0141 | Hepe-Chr6:5131041 | 9.04e-46 | transposed | |
Hepe09g1039 | Hepe-Chr9:10797914 | Hepe06g0141 | Hepe-Chr6:5131041 | 1.01e-35 | transposed | |
Hepe10g0900 | Hepe-Chr10:28740608 | Hepe06g0141 | Hepe-Chr6:5131041 | 7.05e-40 | wgd | |
Hepe02g2778 | Hepe-Chr2:76376830 | Hepe06g0141 | Hepe-Chr6:5131041 | 3.92e-57 | wgd | |
Hepe05g0652 | Hepe-Chr5:10713298 | Hepe06g0141 | Hepe-Chr6:5131041 | 4.73e-06 | wgd | |
Hepe06g0141 | Hepe-Chr6:5131041 | Hepe06g0588 | Hepe-Chr6:43230643 | 4.29e-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72853 | PF00069 | Pkinase | 9.20E-45 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0141 | K13418 | - | csv:101208695 | 1124.38 |