Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0163 ATGGCCGCCCTTCACCAAACCGCCGCCTCTCTCCAAGCCAAGCTCCTTCCAACCGTTCGAATCTCCCGAACCACTCCAGTAAACCTCTCCTTCTCCGCCACTTTTCCTTCCCGCGGACTCCGCCTCGGCCACCACCGCTCTCACGGCGGCGCTAAAATGTCCGCCACCGCCGCCGGAAGCTACGCCGCCGCGCTGGCCGAAGTCGCCGCCTCGAACTCCACGCTGGATGCCACAAGCAGCGACGTCGAGAAGATCGAGAGCGTGTTCGCAGATTCGCAGGTGTTCGATTTCTTCGTGAATCCGACGATTAGCCTCGAGAAGAAACTGGAGGTGGTGGATGAAATCGCTTCGTCCTCGTCTCTACAGCCGCATTCGGCGAACTTCTTGAGGATCCTGGTGGACGCGAAGAGGATCGAAATCGTGAAGGATATCGTGACGGAGTTCGAATTGGTGTACAACAAATTGACGCACACGGAGCTTGCAGTGGTGAGTTCGGTTGTGCAGTTAGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGCGGAGCGAAGAATGTGAGGATCAAGACGCTGATCGATCCGAGTTTGGTCGCTGGATTCACTGTCAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTTAAGAAGCAGCTTGAGGAAATCGCTGCTCAGATTGATCTTAGCAACATTCAACTGACAGTATAA 723 54.63 MAALHQTAASLQAKLLPTVRISRTTPVNLSFSATFPSRGLRLGHHRSHGGAKMSATAAGSYAAALAEVAASNSTLDATSSDVEKIESVFADSQVFDFFVNPTISLEKKLEVVDEIASSSSLQPHSANFLRILVDAKRIEIVKDIVTEFELVYNKLTHTELAVVSSVVQLEQQHLAQIAKQVQKLSGAKNVRIKTLIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQIDLSNIQLTV 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6006628 6007821 + Hsped.06g01630.1 Hepe06g0163 571538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0163 240 Pfam ATP synthase delta (OSCP) subunit 58 230 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 PRINTS ATP synthase delta subunit signature 206 224 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 PRINTS ATP synthase delta subunit signature 137 151 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 PRINTS ATP synthase delta subunit signature 126 137 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 PRINTS ATP synthase delta subunit signature 57 76 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 PRINTS ATP synthase delta subunit signature 188 203 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 Gene3D - 57 149 IPR026015 -
Hepe06g0163 240 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 54 156 IPR026015 -
Hepe06g0163 240 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 190 209 IPR020781 GO:0015986(InterPro)|GO:0016020(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 NCBIfam ATP synthase F1 subunit delta 58 230 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 Hamap ATP synthase subunit delta [atpD]. 53 233 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Hepe06g0163 240 PANTHER ATP SYNTHASE DELTA CHAIN 30 231 IPR000711 GO:0009535(PANTHER)|GO:0009772(PANTHER)|GO:0009773(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0045261(PANTHER)|GO:0046933(PANTHER)|GO:0046933(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2045 Hepe-Chr5:70967160 Hepe06g0163 Hepe-Chr6:6006628 2.21e-15 dispersed
Hepe06g0163 Hepe-Chr6:6006628 Hepe02g1237 Hepe-Chr2:15464783 9.21e-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0163 K02113 - csv:101211740 378.252