Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0180 ATGCGTGGTGTTTACGTCGAACGATGTCGAAGAAGGTCGAAGAAGAAGAACGATGTCAAAGAAGGTATGCGTATGTCTTTTCTGCCTCTAGGTCGAATGGAAGCAACTTTTGAGGATGAATTTAATTCTAGGCGGCGTGGTGCAGTCATGCAAAGACCTACGTTGATTGTTGCTTCGTTGGCTATCACACTTCCTATGGTTAAACATATCTGGTCCCCCCAGTGTCGTGCATTCACACACCGACCACCACTTATGGATTCGTTCTGTCTAGGCCCAATTATTAATTATTTGGGGCAGGAGTTTTTCAACATCATTCTCAAGAGCTCTAGGGAATCTAAACTTGACTCATTGGATGCAAAAGAGATGTTTGCGCTGTTGGCTACTTCTTGGAATGCAAGTTTGGCTGCCCACAGGATATTGAAGGAGTTTCGATCAAAGAGCAGAGGGATTCAACTAGCACTGAGAATTGGTCAATCTGCATTTGCGGCTGCTTCAATCGGAGTTATGGTTTCTGCTTTGGGTTTTGCTAGCTTCGCTGCTTTCTGCTCTGAAGAAGGAAGCGACTCTTTTCTTTGGATCCATTTCCATTTTCTGGTTTGTTCTTCTTCGTCAGATTTTGCAGCAACAATGGCAGCTGACAAAGTGACACTGTTGGATTTTTTGCCGAGCATGTTTGGGATGAGAGTAAGAGTAGCCCTGGCCTTGAAGGGTGTGGCGTATGAATATGTGGATGAAGATCTGAGGAACAAGAGCCCTTTGCTTCTGGAAATGAACCCAATTCATAAGAAAATCCCTGTTCTTCTTCATAATGGAAAACCCATCTCTGAATCTTCCATTATCGTCGAGTATATCGATGAAGTCTGGAAGGATAAAGCTCCCCTTTTGCCATCTGATCCTTATGAGATAGCTCATGCCAGATTTTGTGTGGATTTCATTGACAAAAAGGAACACGCAAGGCCAGATTTCAAACAGAACCAACCATGCCAATTCACCTCAAGAATGCATGAGAAGAGAAGTTTAAGCTATGTTGATGGACCCATTCTCGTGCCACTCGATGACGCTTTTCTCGCAAAAAACGTGCAAGGAATCCAAACAGCTTGA 1101 43.78 MRGVYVERCRRRSKKKNDVKEGMRMSFLPLGRMEATFEDEFNSRRRGAVMQRPTLIVASLAITLPMVKHIWSPQCRAFTHRPPLMDSFCLGPIINYLGQEFFNIILKSSRESKLDSLDAKEMFALLATSWNASLAAHRILKEFRSKSRGIQLALRIGQSAFAAASIGVMVSALGFASFAAFCSEEGSDSFLWIHFHFLVCSSSSDFAATMAADKVTLLDFLPSMFGMRVRVALALKGVAYEYVDEDLRNKSPLLLEMNPIHKKIPVLLHNGKPISESSIIVEYIDEVWKDKAPLLPSDPYEIAHARFCVDFIDKKEHARPDFKQNQPCQFTSRMHEKRSLSYVDGPILVPLDDAFLAKNVQGIQTA 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6612609 6619742 + Hsped.06g01800.1 Hepe06g0180 571555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0180 366 FunFam Tau class glutathione S-transferase 210 297 - -
Hepe06g0180 366 Gene3D Glutaredoxin 201 297 - -
Hepe06g0180 366 CDD GST_N_Tau 215 288 - -
Hepe06g0180 366 SUPERFAMILY Thioredoxin-like 214 290 IPR036249 -
Hepe06g0180 366 Pfam Glutathione S-transferase, N-terminal domain 214 286 IPR004045 -
Hepe06g0180 366 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 214 318 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe06g0180 366 SUPERFAMILY GST C-terminal domain-like 286 316 IPR036282 -
Hepe06g0180 366 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 213 292 IPR004045 -
Hepe06g0180 366 SFLD Glutathione Transferase (cytosolic) 215 315 IPR040079 -
Hepe06g0180 366 SFLD Main (cytGST) 215 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0440 Hepe-Chr1:58995055 Hepe06g0180 Hepe-Chr6:6612609 6.96e-17 dispersed
Hepe06g0180 Hepe-Chr6:6612609 Hepe07g0920 Hepe-Chr7:11994106 1.28e-62 dispersed
Hepe06g0180 Hepe-Chr6:6612609 Hepe07g1403 Hepe-Chr7:46400513 7.06e-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0180 K00799 - csv:101218562 180.259