Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0198 ATGGAAACCAAAGGCCGACTCATTGCTGGTTCTCACAACAGAAATGAGTTTGTTCTCATCAATGCTGATGAGGTTGCAAGAGTGACAGCTGTGAAAGAGTCGAGTGGGCAAATTTGCCAGATCTGTGGGGATGAGTTAGAAACCACCGTAGATAAGGAGCCATTTGTTGCCTGTAATGAATGTGCCTTTCCAGTTTGTAGACCTTGCTATGAATATGAAAGAAGAGAGGGAAATCAAGCTTGTCCTCAATGCAAAACCAGATACAAGCGTCTTAAAGGCAGTCCTCGGGTTGAAGGTGATGATGAAGAAGATGATATCGATGATCTGGAGAATGAGTTTGACATTGCAAACAAGGATCCTAACAGTGTATCTGAGGCAATGCTCTATCCTCACCTCACAGTCGGTCGTGGTTCTCATGCTAATGGTTCTGGAAATATGGATTCGGACCTCGACTCCGCATCTGTCCCGACTGATATTCCTCTCCTCACCTATGGCCAAGAGGATGCTGGAATTTCCTCCGATAAGCATGCTCTAATTATTCCTCCTTTTATTAGCCGTGGGAAAAAGGTCCATCCGGCGCCATTCACCGATTCTGCCATGTCTGCCAATCCAAGGCCAATGGATCCGAACAAGGATTTAGCTGTGTATGGATATGGAACTGTTGCATGGAAAGAAAGAATGGAGGACTGGCGGAAGAAACAAAATGAAAGACTTCAAGTAATTAAGCATGAGGGTGGAGGTGGGAAAGGTGATGATGAGTTCGACGATACAGATTTGCCTATGATGGATGAAGGGAGGCAACCACTTTCCAGAAAACTGCCTATCGCCTCGAGCAAAATAAATCCATACAGAATGATAATCGTACTTCGTATTGTCATTCTTTGCCTCTTTTTCCACTATCGTATCCTTCATCCTGTCCATGAGGCATATGGGCTGTGGTTAACATCAGTAATCTGTGAGATATGGTTTGCTGCATCATGGATATTGGATCAGTTCCCAAAATGGTGTCCCATTGTCCGAGAAACTTACCTTGATCGGTTATCGTTAAGATATGAAAAAGATGGCAAGCCATCTGAGCTGGCTTCTATAGACGTTTACGTCAGTACAGTGGATCCATTGAAGGAGCCTCCTCTCATCACAGCAAACACCGTACTGTCTATTCTTGCTGTCGATTATCCAGTAGACAAGGTTTCATGCTACGTTTCTGATGATGGTGCTGCCATGCTTACTTTTGAAGCCCTTTCAGAAACTTCCGAGTTTGCAAGAAAGTGGGTTCCTTTCTGCAAGAAGTTCAATATTGAACCTCGGGCCCCAGAATGGTATTTTGCCCAGAAGGTCGACTATTTGAAAGACAAAGTTGATCCAACATTCGTCAGGGAACGACGTGCAATGAAGAGGGACTATGAAGAATTTAAAGTTCGAGTCAATGGACTCGTCGCCATGGCTCAAAAAGTTCCTGAAGATGGATGGACAATGCAGGACGGAACTCCATGGCCCGGGAACAACGTCAGGGATCATCCCGGAATGATTCAGGTATTCCTCGGTCAAAATGGGGTTCGTGACTTGGAGGGAAAGGAATTACCTCGTCTAGTGTATGTATCTCGTGAGAAGAGGCCGGGATTTGATCACCACAAGAAAGCTGGTGCCATGAATGCTCTGATGCGTGTCTCGGCAATCATCTCGAATGCTCCATACATGTTGAATGTCGATTGTGATCACTACATCAACAACAGCAAGGCACTTAGAGAAGCAATGTGCTTCATGATGGACCCAATTTCTGGAAAAAGAATATGCTATGTGCAGTTTCCACAAAGATTTGATGGGATTGATAGGCACGATCGATACTCAAATCGCAATGTTGTATTCTTCGATATCAACATGAAAGGATTAGACGGTATTCAAGGGCCGATATATGTCGGAACTGGGTGTGTCTTCAGGAGGCAGGCTCTTTATGGGTATGATGCCCCTGCCAAGAAGAAAGCACCAAGAAGGACTTGCAATTGTCTGCCAAAATGGTGCTGCTGTTGCTCTGGAACTAGAAAGAAGACTAAAGCAAAGACCAGTGATAAAAAGAAGTTAAAGACCAAAGATACGTCGAAGCAGATTCACGCACTCGAGAATATTGAGGAAGGAATTGAAGGAATAGATAATGAGAAATCATCTCTGATGCCCCAAGTTAAGTTTGAGAAGAAGTTTGGGCAATCACCAGCATTCATTGCTTCCACACTTATGGAAGACGGTGGCGTGCCCGGAGGAGGAACTTCTGCTTCATTGTTGAAAGAAGCCATCCATGTAATCAGTTGTGGTTACGAAGATAAATCCGAGTGGGGTAAAGAGGTAGGGTGGATATATGGGTCTGTTACAGAGGATATTTTAACAGGTTTCAAGATGCATTGCCATGGATGGAGATCAGTTTATTGCATTCCAAAACGGCCAGCATTCAAGGGTTCAGCTCCTATTAACTTGTCTGATCGTCTGCACCAAGTTCTTCGGTGGGCTCTTGGATCTGTTGAAATTCTGTTGAGCAGGCACTGTCCAATATGGTACGGCTATGGATGTGGTTTGAAGTGGCTTGAGCGTTTCTCGTACATAAACTCCGTTGTTTATCCATTGACGTCAGTTCCATTGATCGCTTATTGTACCCTCCCGGCTGTCTGCCTGCTTACTGGGAAGTTTATCGTCCCTGAGCTAAGCAACTTTGCCAGTATCATTTTCATGGCCCTTTTCATATCTATAGCAGCAACTGGTATCCTAGAAATGCAGTGGGGAGGTGTTGGGATTCACGATTGGTGGAGAAACGAGCAGTTCTGGGTTATCGGTGGTGCTTCGTCCCATCTTTTTGCGCTTTTCCAGGGTCTCCTAAAGGTTTTGGCTGGTGTTAACACAAGTTTCACTGTCACGTCCAAAGGAGGAGACGATGGGGATTTTGCCGAGCTTTACCTCTTCAAGTGGACGTCGTTGTTGGTCCCTCCCTTGACCTTATTGATCATAAACATTATTGGAGTAGTCGTTGGAGTTTCAGATGCCATCAACAACGGTTACGAGTCATGGGGCCCGCTCATCGGTAAGATGTTCTTTGCATTCTGGGTGATCGTCCATCTGTATCCATTCCTCAAGGGTTTGATGGGGAAGCAAGACAAGGTACCAACCATTATCATTGTGTGGTCAATTCTTCTATCATCCATACTGTCGCTTCTATGGGTCCGAATCAACCCCTTCCTCGACAAGGGTGGCATTGTATTGGAAGTTTGCGGGTTAAACTGTGACGGCTAA 3273 45.1 METKGRLIAGSHNRNEFVLINADEVARVTAVKESSGQICQICGDELETTVDKEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRLKGSPRVEGDDEEDDIDDLENEFDIANKDPNSVSEAMLYPHLTVGRGSHANGSGNMDSDLDSASVPTDIPLLTYGQEDAGISSDKHALIIPPFISRGKKVHPAPFTDSAMSANPRPMDPNKDLAVYGYGTVAWKERMEDWRKKQNERLQVIKHEGGGGKGDDEFDDTDLPMMDEGRQPLSRKLPIASSKINPYRMIIVLRIVILCLFFHYRILHPVHEAYGLWLTSVICEIWFAASWILDQFPKWCPIVRETYLDRLSLRYEKDGKPSELASIDVYVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFAQKVDYLKDKVDPTFVRERRAMKRDYEEFKVRVNGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDLEGKELPRLVYVSREKRPGFDHHKKAGAMNALMRVSAIISNAPYMLNVDCDHYINNSKALREAMCFMMDPISGKRICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPAKKKAPRRTCNCLPKWCCCCSGTRKKTKAKTSDKKKLKTKDTSKQIHALENIEEGIEGIDNEKSSLMPQVKFEKKFGQSPAFIASTLMEDGGVPGGGTSASLLKEAIHVISCGYEDKSEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSVPLIAYCTLPAVCLLTGKFIVPELSNFASIIFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTSFTVTSKGGDDGDFAELYLFKWTSLLVPPLTLLIINIIGVVVGVSDAINNGYESWGPLIGKMFFAFWVIVHLYPFLKGLMGKQDKVPTIIIVWSILLSSILSLLWVRINPFLDKGGIVLEVCGLNCDG 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7163101 7170392 + Hsped.06g01980.1 Hepe06g0198 571573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0198 1090 CDD mRING-HC-C4C4_CesA 37 87 - -
Hepe06g0198 1090 Pfam Cellulose synthase 363 1077 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Hepe06g0198 1090 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 507 655 IPR029044 -
Hepe06g0198 1090 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 283 1058 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Hepe06g0198 1090 SUPERFAMILY Nucleotide-diphospho-sugar transferases 377 901 IPR029044 -
Hepe06g0198 1090 Coils Coil 99 119 - -
Hepe06g0198 1090 SUPERFAMILY RING/U-box 29 107 - -
Hepe06g0198 1090 FunFam Cellulose synthase 21 112 - -
Hepe06g0198 1090 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Hepe06g0198 1090 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Hepe06g0198 1090 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Hepe06g0198 1090 FunFam Cellulose synthase 480 654 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1204 Hepe-Chr3:66185329 Hepe06g0198 Hepe-Chr6:7163101 1.03e-309 dispersed
Hepe04g1138 Hepe-Chr4:66506582 Hepe06g0198 Hepe-Chr6:7163101 0.0 dispersed
Hepe06g0198 Hepe-Chr6:7163101 Hepe09g0560 Hepe-Chr9:5290150 0.0 dispersed
Hepe06g0198 Hepe-Chr6:7163101 Hepe02g1128 Hepe-Chr2:13952233 1.96e-283 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0198 K10999 - csv:101214061 2128.98