Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0214 ATGGCTTCCTTAGCAGCCTCCACCGCTGCCGCCTCGCTCGGCGTCTCCGAAATGCTCAGGAATCCCCTCGGCTTCACCGCCGCCTCCGCTAGGTCCGCTCCCTCCGCTTCTACCCCGGTCACCTTCAAGACTGTTGCGCTTTTCGGGAAGAAGCCGGCTGCCAAGCCGAAGCCCTCTGCCGTTGTATCTCCGGTCAACGACGAGCTCGCCAAGTGGTATGGTCCCGACAGAAGGATTTTCTTGCCGGACGGGCTGTTCGACCGATCCGATATCCCCGAGTACTTGAACGGAGAAGTCCCCGGAGACTACGGTTACGATCCCTTTGGACTTAGCAAGAAACCAGAAGACTTCACCAAATACCAAGCATTTGAATTGATTCATGCACGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGCGCCAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAGTATTCCCATCAACCTCGTTGTCGCCGTGGCTGCTGAGGTTGTTCTTCTTGGTGGTGCTGAATATTACAGAATCACCAATGGCTTGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCATTCGACCCGTTGGGGCTGGCCGACGACCCGGACCAGGCGGCAATCTTGAAGGTGAAGGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTTCAGGCATACGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCCAAGCATTTGAGTGATCCTTTTGCAAACAACTTGCTCACAGTCATTTCTGGGAATGCTGAGAGAGTTCCAACTCTTTAA 873 53.38 MASLAASTAAASLGVSEMLRNPLGFTAASARSAPSASTPVTFKTVALFGKKPAAKPKPSAVVSPVNDELAKWYGPDRRIFLPDGLFDRSDIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVVAVAAEVVLLGGAEYYRITNGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7695887 7703649 + Hsped.06g02140.1 Hepe06g0214 571589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0214 290 Gene3D Chlorophyll a/b binding protein domain 79 290 - -
Hepe06g0214 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 27 285 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Hepe06g0214 290 FunFam Chlorophyll a-b binding protein, chloroplastic 79 290 - -
Hepe06g0214 290 SUPERFAMILY Chlorophyll a-b binding protein 90 280 - -
Hepe06g0214 290 Pfam Chlorophyll A-B binding protein 92 253 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0768 Hepe-Chr4:61689577 Hepe06g0214 Hepe-Chr6:7695887 2.53e-35 dispersed
Hepe06g0214 Hepe-Chr6:7695887 Hepe07g1785 Hepe-Chr7:60430990 1.35e-69 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0214 K08916 - csv:101218137 507.294