Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0251 ATGGTTAGCGGAGGAAGCGATATGGTAATTGATGGTAACGAACAGAAGTCGAAGAACGTTGTGCCTGATGGGTTCGATGCCAATTATCTCAAAATTTACTACGGAAAGCTTTTTCCGTATACTGATTTTTACAAATGGATGTCTTATGGAAATGATGGCAAGCATCCGGGCAGTGACCAAACCTATTTTGGCCGAAGAGAGTTCTCATTCACGTTGGATAATGATATTTATCTACGATACCAATCTTTCAACAGTTTGTCTGAAATGGAAAATTCGATCAAGGAAAAGAATCCTTTTAAAATTGATATTGGGCCTGTATACAGTGTGGATCCTGCAAAGAGACGTGCGTATGCTGGTGATAATGTATTTACTCCAGTGGAGAGAGAGTTGGTTTTTGATATAGATATGACTGATTACGATGATGTTAGATATTGTTGTTCAGGAGCTGACGTTTGCTTGGATTGCTGGCCTTTAATGACTGCTGCTATCAAAGTGATTGATACTACCCTCCGAAATGACTTTGGATTTAACCACTTACTGTGGGTATTTAGTGGTCGACGTGGTGTTCATTGTTGGGTCTGTGATGGCAAAGCAAGAAGGTTGTCTAATGAACAGAGAGCTGCCATTGCTGATTATTTCCGTTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTTACGGGTCCAGTTCTTCACCCATTTCTTGCGAGATCATACATTGAAGTTCTCGAGGATAGTTTTGAATCAAAATTGCTTTGTAGTCAAAAGCTTTTCTCAACTGAGGAGAGATATGAGAAGATCTTAGATATGATTCATGATGAATCCATTACCTCAGAGCTTCGGGGAAGGTGGCAAGAGAATAGGCGGCCCTCTAAAAAAGATGTTAATTCTGCAAGATGGGAGCAACTAAAAAATATGTTGCAATCAGGGAAACATAAGGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCTTTTACCTACCCGAGGCTTGATTCAGAGGTTACTAGACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTGTTTGTGTCCCTATCAACCCTGAACGCTGTGACGAGTTTGATCCCACTACTGTACCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCAGCAAATATGGAAGTAGATGGTGAGACTGACTTGGATAGAACCTCACTTGGGGAATCGATTAGGTTTTTCAGATCATCATTCTTACAGCCATTACTGAAATCATGCAAGGAGGAGATAGAATCTTCATACAATGCTAAAGTACAACAGTCGAAAAGTCCACTGAGTTGGTAG 1338 40.51 MVSGGSDMVIDGNEQKSKNVVPDGFDANYLKIYYGKLFPYTDFYKWMSYGNDGKHPGSDQTYFGRREFSFTLDNDIYLRYQSFNSLSEMENSIKEKNPFKIDIGPVYSVDPAKRRAYAGDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRNDFGFNHLLWVFSGRRGVHCWVCDGKARRLSNEQRAAIADYFRLYQGNENSRKKISLTGPVLHPFLARSYIEVLEDSFESKLLCSQKLFSTEERYEKILDMIHDESITSELRGRWQENRRPSKKDVNSARWEQLKNMLQSGKHKAQGMRRHVEEIVFSFTYPRLDSEVTRHMNHLLKAPFCVHPKTGRVCVPINPERCDEFDPTTVPTVAQLLEELNAANMEVDGETDLDRTSLGESIRFFRSSFLQPLLKSCKEEIESSYNAKVQQSKSPLSW 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9137155 9163345 + Hsped.06g02510.1 Hepe06g0251 571626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0251 445 CDD AE_Prim_S 39 374 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
Hepe06g0251 445 Coils Coil 380 400 - -
Hepe06g0251 445 PANTHER DNA PRIMASE SMALL SUBUNIT 28 431 - GO:0003896(PANTHER)|GO:0005658(PANTHER)|GO:0006269(PANTHER)
Hepe06g0251 445 SUPERFAMILY Prim-pol domain 27 393 - -
Hepe06g0251 445 FunFam DNA primase 17 426 - -
Hepe06g0251 445 Gene3D DNA primase, PRIM domain 17 426 - -
Hepe06g0251 445 Pfam DNA primase small subunit 132 365 IPR002755 GO:0003896(InterPro)|GO:0006269(InterPro)
Hepe06g0251 445 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 31 383 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0251 K02684 - csv:101203146 840.106