Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0254 ATGGCTCTTCTCTTAGCAACAAGTTCCATGGACATCGAACAACAACACTTTGCTCACGCCATGCAACTAGCCACCTCGTTGGCATTGCCAATGACACTTCAAGCAGCCTTCGAGGTTGGCGTGTTTGAGATCTTGGCCAAGGCCGGCCATGGGGCCAAACTCTCGCCCGTCGAGATAGCGGCCGAGATAACCACCACAAACCCAAATGCTGCGTCGATGCTCGATCGGATCCTTCGGCTTCTGGCTAGCCACTCGGTGGTAGACTGCTCTATGACCACTGACCAACAAGGGAATTTGCAGAGACTCTATAGCCTCACGCCTGTTTCTAAGTATTATGTTCGTAATGAAGATGGTGTATCGTTGGGTCCTCTCATACAGTTGCTCCATGAAACAAAATTTCTTGAGAGTTGGAGAGAACTGAAGAATGCAATTGTAGAAGGAGGAATTCCTTTCAATAGGGCTCATGGGGGAGCACATGTGTTTGAAATCTGTGGCTTGGATCCAAAATTTAACCAAGTTTTCAACACTGCAATGTTGAATCACACTACTATAGTGGCTAAGAAGATTGTTGAGTCCTACAAGGACTTAGCAAACCTCAACCAACTGGTTGATGTCGGTGGAGGCTTAGGGGTTACCCTTCAAATCATCACTTCTACATACCCTTCAATTAAGGGCATCAACTTTGATTTGCCTCATGTCATTCACCATGCTCCCTCCTATCCAGGTGTAGAACATGTAGGAGGTGATATGTTTGAGTGTGTTCCAAAAGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGCGATAATCATTGTGTAAAGTTATTAAAGAACTGCCATGTAGCGACTCCAAATGATGGAAAAGTAATCGTAGTGGACTCAATGCTTCCAACAGTGCCCGACACCACGACTTTAGTGAAAAGTGTTGGTCAGATTGATGCGATTTTAATGACTCATTTTCAAGGAGGAAAGGAGCGAACCGAAGATGAATTTAAAGCTCTTGCAACCGAAGCTGGATTTAAGCACATCACATTCAAGTGTATTGTATGTAATCTTTGGATTATGGAATTCTCTAAATGA 1086 44.11 MALLLATSSMDIEQQHFAHAMQLATSLALPMTLQAAFEVGVFEILAKAGHGAKLSPVEIAAEITTTNPNAASMLDRILRLLASHSVVDCSMTTDQQGNLQRLYSLTPVSKYYVRNEDGVSLGPLIQLLHETKFLESWRELKNAIVEGGIPFNRAHGGAHVFEICGLDPKFNQVFNTAMLNHTTIVAKKIVESYKDLANLNQLVDVGGGLGVTLQIITSTYPSIKGINFDLPHVIHHAPSYPGVEHVGGDMFECVPKGDAIFMKWILHDWSDNHCVKLLKNCHVATPNDGKVIVVDSMLPTVPDTTTLVKSVGQIDAILMTHFQGGKERTEDEFKALATEAGFKHITFKCIVCNLWIMEFSK 361
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 9198598 9201721 + Hsped.06g02540.1 Hepe06g0254 571629
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0254 361 PANTHER O-METHYLTRANSFERASE 17 349 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Hepe06g0254 361 FunFam Caffeic acid 3-O-methyltransferase 4 112 - -
Hepe06g0254 361 FunFam Caffeic acid O-methyltransferase 113 361 - -
Hepe06g0254 361 Gene3D Vaccinia Virus protein VP39 113 361 IPR029063 -
Hepe06g0254 361 Pfam O-methyltransferase domain 137 343 IPR001077 GO:0008171(InterPro)
Hepe06g0254 361 SUPERFAMILY Winged helix DNA-binding domain 14 115 IPR036390 -
Hepe06g0254 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 361 IPR016461 GO:0008168(InterPro)
Hepe06g0254 361 Pfam Dimerisation domain 31 82 IPR012967 GO:0046983(InterPro)
Hepe06g0254 361 Gene3D - 5 112 IPR036388 -
Hepe06g0254 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 359 IPR029063 -
Hepe06g0254 361 PIRSF O-mtase 3 361 IPR016461 GO:0008168(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0138 Hepe-Chr6:4987195 Hepe06g0254 Hepe-Chr6:9198598 2.47e-76 dispersed
Hepe06g0254 Hepe-Chr6:9198598 Hepe06g0634 Hepe-Chr6:47834097 7.27e-200 dispersed
Hepe06g0254 Hepe-Chr6:9198598 Hepe06g0137 Hepe-Chr6:4981374 4.57e-230 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0254 K13066 - csv:101214916 511.916