Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe06g0254 | ATGGCTCTTCTCTTAGCAACAAGTTCCATGGACATCGAACAACAACACTTTGCTCACGCCATGCAACTAGCCACCTCGTTGGCATTGCCAATGACACTTCAAGCAGCCTTCGAGGTTGGCGTGTTTGAGATCTTGGCCAAGGCCGGCCATGGGGCCAAACTCTCGCCCGTCGAGATAGCGGCCGAGATAACCACCACAAACCCAAATGCTGCGTCGATGCTCGATCGGATCCTTCGGCTTCTGGCTAGCCACTCGGTGGTAGACTGCTCTATGACCACTGACCAACAAGGGAATTTGCAGAGACTCTATAGCCTCACGCCTGTTTCTAAGTATTATGTTCGTAATGAAGATGGTGTATCGTTGGGTCCTCTCATACAGTTGCTCCATGAAACAAAATTTCTTGAGAGTTGGAGAGAACTGAAGAATGCAATTGTAGAAGGAGGAATTCCTTTCAATAGGGCTCATGGGGGAGCACATGTGTTTGAAATCTGTGGCTTGGATCCAAAATTTAACCAAGTTTTCAACACTGCAATGTTGAATCACACTACTATAGTGGCTAAGAAGATTGTTGAGTCCTACAAGGACTTAGCAAACCTCAACCAACTGGTTGATGTCGGTGGAGGCTTAGGGGTTACCCTTCAAATCATCACTTCTACATACCCTTCAATTAAGGGCATCAACTTTGATTTGCCTCATGTCATTCACCATGCTCCCTCCTATCCAGGTGTAGAACATGTAGGAGGTGATATGTTTGAGTGTGTTCCAAAAGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGCGATAATCATTGTGTAAAGTTATTAAAGAACTGCCATGTAGCGACTCCAAATGATGGAAAAGTAATCGTAGTGGACTCAATGCTTCCAACAGTGCCCGACACCACGACTTTAGTGAAAAGTGTTGGTCAGATTGATGCGATTTTAATGACTCATTTTCAAGGAGGAAAGGAGCGAACCGAAGATGAATTTAAAGCTCTTGCAACCGAAGCTGGATTTAAGCACATCACATTCAAGTGTATTGTATGTAATCTTTGGATTATGGAATTCTCTAAATGA | 1086 | 44.11 | MALLLATSSMDIEQQHFAHAMQLATSLALPMTLQAAFEVGVFEILAKAGHGAKLSPVEIAAEITTTNPNAASMLDRILRLLASHSVVDCSMTTDQQGNLQRLYSLTPVSKYYVRNEDGVSLGPLIQLLHETKFLESWRELKNAIVEGGIPFNRAHGGAHVFEICGLDPKFNQVFNTAMLNHTTIVAKKIVESYKDLANLNQLVDVGGGLGVTLQIITSTYPSIKGINFDLPHVIHHAPSYPGVEHVGGDMFECVPKGDAIFMKWILHDWSDNHCVKLLKNCHVATPNDGKVIVVDSMLPTVPDTTTLVKSVGQIDAILMTHFQGGKERTEDEFKALATEAGFKHITFKCIVCNLWIMEFSK | 361 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 9198598 | 9201721 | + | Hsped.06g02540.1 | Hepe06g0254 | 571629 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe06g0254 | 361 | PANTHER | O-METHYLTRANSFERASE | 17 | 349 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
| Hepe06g0254 | 361 | FunFam | Caffeic acid 3-O-methyltransferase | 4 | 112 | - | - | |
| Hepe06g0254 | 361 | FunFam | Caffeic acid O-methyltransferase | 113 | 361 | - | - | |
| Hepe06g0254 | 361 | Gene3D | Vaccinia Virus protein VP39 | 113 | 361 | IPR029063 | - | |
| Hepe06g0254 | 361 | Pfam | O-methyltransferase domain | 137 | 343 | IPR001077 | GO:0008171(InterPro) | |
| Hepe06g0254 | 361 | SUPERFAMILY | Winged helix DNA-binding domain | 14 | 115 | IPR036390 | - | |
| Hepe06g0254 | 361 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 21 | 361 | IPR016461 | GO:0008168(InterPro) | |
| Hepe06g0254 | 361 | Pfam | Dimerisation domain | 31 | 82 | IPR012967 | GO:0046983(InterPro) | |
| Hepe06g0254 | 361 | Gene3D | - | 5 | 112 | IPR036388 | - | |
| Hepe06g0254 | 361 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 117 | 359 | IPR029063 | - | |
| Hepe06g0254 | 361 | PIRSF | O-mtase | 3 | 361 | IPR016461 | GO:0008168(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe06g0138 | Hepe-Chr6:4987195 | Hepe06g0254 | Hepe-Chr6:9198598 | 2.47e-76 | dispersed | |
| Hepe06g0254 | Hepe-Chr6:9198598 | Hepe06g0634 | Hepe-Chr6:47834097 | 7.27e-200 | dispersed | |
| Hepe06g0254 | Hepe-Chr6:9198598 | Hepe06g0137 | Hepe-Chr6:4981374 | 4.57e-230 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe06g0254 | K13066 | - | csv:101214916 | 511.916 |