Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe06g0319 | ATGAAAGTTGCAGGTGTTCATGAAACCACATATAATTCCATCATGAAGTGCGACGTGGATATCAGGAAGGATCTGTATGGCAACATTGTCTTCTCCGGTGGTTCGACCATGTTTACGGGCATTGCGGATAGAATGAGCAAGGAAATCTCAGCATTGGCTCGGAGCAGCATGAAGATCAAGGTGGTGGCACCTCCAGAAAGGAAATACAGTGTCTGGATTGGTGGTTCCATATTGGCTTCTCTGAGTACCTTCCAGCAGATGTGGATTGCAAAGGCTGAGTATGATGAATCTGGGCCATCAATTGTGCACAGGAAGTGCTTCTAA | 324 | 46.3 | MKVAGVHETTYNSIMKCDVDIRKDLYGNIVFSGGSTMFTGIADRMSKEISALARSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF | 107 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 11316899 | 11317314 | - | Hsped.06g03190.1 | Hepe06g0319 | 571694 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe06g0319 | 107 | PANTHER | ACTIN | 4 | 99 | IPR004000 | GO:0005737(PANTHER) | |
| Hepe06g0319 | 107 | FunFam | Major actin | 1 | 70 | - | - | |
| Hepe06g0319 | 107 | ProSitePatterns | Actins signature 2. | 88 | 96 | IPR004001 | - | |
| Hepe06g0319 | 107 | Pfam | Actin | 2 | 107 | IPR004000 | - | |
| Hepe06g0319 | 107 | Gene3D | - | 66 | 107 | - | - | |
| Hepe06g0319 | 107 | SUPERFAMILY | Actin-like ATPase domain | 3 | 107 | IPR043129 | - | |
| Hepe06g0319 | 107 | FunFam | Putative actin-related protein 5 | 71 | 99 | - | - | |
| Hepe06g0319 | 107 | Gene3D | - | 1 | 65 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe06g0319 | Hepe-Chr6:11316899 | Hepe08g1258 | Hepe-Chr8:13509601 | 4.81e-66 | dispersed | |
| Hepe04g0054 | Hepe-Chr4:21657288 | Hepe06g0319 | Hepe-Chr6:11316899 | 1.52e-71 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe06g0319 | K10355 | - | rcu:8267765 | 206.068 |