Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0344 ATGAACAAGGGGACTGATAGCTATGGTGTTACTACTGGCTTTGGTGCTACGTCTCATAGGAGGACCAAACAAGGTGGTGCTCTTCAGAAGGAGTTGATTCGATTCTTGAATGCGGGGATCTTTGGAAGTGGGGCTGAGTCGAACCATACTTTGTCTCACTCGGCTACGAGGGCAGCCATGTTGGTGAGAATTAATACTCTTCTTCAAGGCTACTCGGGTATTCGATTTGAGATTTTGGAAGCCATAACGAAACTCTTGAATAATAACATCACTCCATGTTTGCCTCTTCGTGGAACCATTACTGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTGCTCACTGGTCGACCAAACTCCAAGGCCATCGGACCAAATGGAGAAATTATTGATGCCAAGGAGGCTTTCGAGCAAGCTGGTATTCCTTCTCAGTTCTTTGAGTTGCAACCTAAGGAAGGTCTTGCTCTTGTTAATGGTACTGCTGTTGGTTCTGGATTGGCTTCTATTGTTCTCTTTGAGGCGAATATTTTGGCTGTTTTGTCAGAGATTCTATCTGCCATTTTTGCTGAGGTCATGCAAGGAAAGCCTGAATTTACCGATTATTTGACCCATAAGTTGAAGCATCATCCTGGTCAGATTGAAGCCGCTGCAATTATGGAGCATATTTTGGACGGAAGTTCTTATATGAAAACAGCCAAGAAATTGCATGAAATGGATCCCCTTCAAAAGCCCAAACAAGATCGTTATGCTCTTAGAACTTCACCCCAATGGCTTGGTCCCTTGATTGAAGTGATTCGATTCTCCACAAAGTCAATTGAACGGGAGATTAATTCAGTCAACGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCATTACATGGAGGAAACTTTCAAGGAACACCAATTGGAGTTTCTATGGACAACACTCGTTTGGCCATTGCGTCAATTGGGAAGCTCATGTTTGCCCAATTCTCAGAACTTGTTAATGATTTCTACAACAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAATCCAAGTTTGGATTATGGATTTAAAGGAGCTGAAATTGCCATGGCTTCATACTGCTCCGAGCTTCAATACCTTGCAAATCCAGTGACAAGTCATGTTCAAAGCGCCGAGCAACACAACCAAGATGTTAATTCTCTTGGTTTGATTTCTTCAAGGAAAACAACTGAAGCCATTGATATTCTAAAACTCATGTCATCAACATTTCTGGTTGCTCTATGCCAAGCAATTGATTTGAGACATTTGGAGGAAAACTTGAAGAGCGTTGTGAAAAACACTGTTAGCCAAATAGCCAAGAAAGTGTTGACCACTTCTTCTAATGGTGTACTTCACCCATCAAGATTTTGCGAGAAAGATCTACTCAAAGTTGTTGACAGAGAGTACACTTTCGCTTATATCGATGATCCATGCAGTGCTACTTACCCATTAAGTCAAAAGTTGAGGCAAGTTCTCGTTGAGCATGCACTTGCTAACGGTGATGATGAAAAGAACGCAGACACTTCAATCTTCCAGAAGATTGTTGCTTTCGAGGAGGAACTAAAGGCAGTCTTACCAAAGGAAGTTGAAAATGCTAGGTTGGCATATGAGAGTGGAAATTCTAAAATTGAAAATCAAATCAAGGATTGTAGATCTTATCCATTGTATAGATTTGTGAGAAAAGAGTTGGGAACGGAACTGCTGACTGGTGAAAGAGTGATATCTCCAGGAGAAGAGTGTGAGAAGGTGTTCACAGCTTTGTGTCAAGGCAAGATGATTGACTCCATCTTAGAGTGCTTGAAGGAGTGGAATGATGCTCCAATTCCTATATGCTAA 1851 41.55 MNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGAESNHTLSHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGEIIDAKEAFEQAGIPSQFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTTEAIDILKLMSSTFLVALCQAIDLRHLEENLKSVVKNTVSQIAKKVLTTSSNGVLHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLSQKLRQVLVEHALANGDDEKNADTSIFQKIVAFEEELKAVLPKEVENARLAYESGNSKIENQIKDCRSYPLYRFVRKELGTELLTGERVISPGEECEKVFTALCQGKMIDSILECLKEWNDAPIPIC 616
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 12824240 12826108 + Hsped.06g03440.1 Hepe06g0344 571719
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0344 616 FunFam Phenylalanine ammonia-lyase 163 472 - -
Hepe06g0344 616 NCBIfam phenylalanine ammonia-lyase 1 606 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Hepe06g0344 616 SUPERFAMILY L-aspartase-like 2 616 IPR008948 GO:0003824(InterPro)
Hepe06g0344 616 CDD PAL-HAL 1 426 IPR001106 -
Hepe06g0344 616 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 98 114 IPR022313 GO:0016841(InterPro)
Hepe06g0344 616 Gene3D Fumarase/aspartase (Central domain) 163 610 - -
Hepe06g0344 616 PANTHER HISTIDINE AMMONIA-LYASE 1 616 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Hepe06g0344 616 Gene3D - 429 550 IPR023144 -
Hepe06g0344 616 Pfam Aromatic amino acid lyase 2 440 IPR001106 -
Hepe06g0344 616 FunFam Phenylalanine ammonia-lyase 429 550 - -
Hepe06g0344 616 MobiDBLite consensus disorder prediction 1 23 - -
Hepe06g0344 616 Gene3D - 1 162 IPR024083 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1065 Hepe-Chr5:51629891 Hepe06g0344 Hepe-Chr6:12824240 0.0 dispersed
Hepe06g0344 Hepe-Chr6:12824240 Hepe09g0901 Hepe-Chr9:9037024 3.21e-275 dispersed
Hepe06g0344 Hepe-Chr6:12824240 Hepe04g0943 Hepe-Chr4:63784125 0.0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0344 K10775 - csv:101218617 1160.21