Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0344 | ATGAACAAGGGGACTGATAGCTATGGTGTTACTACTGGCTTTGGTGCTACGTCTCATAGGAGGACCAAACAAGGTGGTGCTCTTCAGAAGGAGTTGATTCGATTCTTGAATGCGGGGATCTTTGGAAGTGGGGCTGAGTCGAACCATACTTTGTCTCACTCGGCTACGAGGGCAGCCATGTTGGTGAGAATTAATACTCTTCTTCAAGGCTACTCGGGTATTCGATTTGAGATTTTGGAAGCCATAACGAAACTCTTGAATAATAACATCACTCCATGTTTGCCTCTTCGTGGAACCATTACTGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTGCTCACTGGTCGACCAAACTCCAAGGCCATCGGACCAAATGGAGAAATTATTGATGCCAAGGAGGCTTTCGAGCAAGCTGGTATTCCTTCTCAGTTCTTTGAGTTGCAACCTAAGGAAGGTCTTGCTCTTGTTAATGGTACTGCTGTTGGTTCTGGATTGGCTTCTATTGTTCTCTTTGAGGCGAATATTTTGGCTGTTTTGTCAGAGATTCTATCTGCCATTTTTGCTGAGGTCATGCAAGGAAAGCCTGAATTTACCGATTATTTGACCCATAAGTTGAAGCATCATCCTGGTCAGATTGAAGCCGCTGCAATTATGGAGCATATTTTGGACGGAAGTTCTTATATGAAAACAGCCAAGAAATTGCATGAAATGGATCCCCTTCAAAAGCCCAAACAAGATCGTTATGCTCTTAGAACTTCACCCCAATGGCTTGGTCCCTTGATTGAAGTGATTCGATTCTCCACAAAGTCAATTGAACGGGAGATTAATTCAGTCAACGACAACCCTTTGATTGATGTTTCAAGAAACAAGGCATTACATGGAGGAAACTTTCAAGGAACACCAATTGGAGTTTCTATGGACAACACTCGTTTGGCCATTGCGTCAATTGGGAAGCTCATGTTTGCCCAATTCTCAGAACTTGTTAATGATTTCTACAACAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAATCCAAGTTTGGATTATGGATTTAAAGGAGCTGAAATTGCCATGGCTTCATACTGCTCCGAGCTTCAATACCTTGCAAATCCAGTGACAAGTCATGTTCAAAGCGCCGAGCAACACAACCAAGATGTTAATTCTCTTGGTTTGATTTCTTCAAGGAAAACAACTGAAGCCATTGATATTCTAAAACTCATGTCATCAACATTTCTGGTTGCTCTATGCCAAGCAATTGATTTGAGACATTTGGAGGAAAACTTGAAGAGCGTTGTGAAAAACACTGTTAGCCAAATAGCCAAGAAAGTGTTGACCACTTCTTCTAATGGTGTACTTCACCCATCAAGATTTTGCGAGAAAGATCTACTCAAAGTTGTTGACAGAGAGTACACTTTCGCTTATATCGATGATCCATGCAGTGCTACTTACCCATTAAGTCAAAAGTTGAGGCAAGTTCTCGTTGAGCATGCACTTGCTAACGGTGATGATGAAAAGAACGCAGACACTTCAATCTTCCAGAAGATTGTTGCTTTCGAGGAGGAACTAAAGGCAGTCTTACCAAAGGAAGTTGAAAATGCTAGGTTGGCATATGAGAGTGGAAATTCTAAAATTGAAAATCAAATCAAGGATTGTAGATCTTATCCATTGTATAGATTTGTGAGAAAAGAGTTGGGAACGGAACTGCTGACTGGTGAAAGAGTGATATCTCCAGGAGAAGAGTGTGAGAAGGTGTTCACAGCTTTGTGTCAAGGCAAGATGATTGACTCCATCTTAGAGTGCTTGAAGGAGTGGAATGATGCTCCAATTCCTATATGCTAA | 1851 | 41.55 | MNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGAESNHTLSHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGEIIDAKEAFEQAGIPSQFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEILSAIFAEVMQGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYMKTAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTTEAIDILKLMSSTFLVALCQAIDLRHLEENLKSVVKNTVSQIAKKVLTTSSNGVLHPSRFCEKDLLKVVDREYTFAYIDDPCSATYPLSQKLRQVLVEHALANGDDEKNADTSIFQKIVAFEEELKAVLPKEVENARLAYESGNSKIENQIKDCRSYPLYRFVRKELGTELLTGERVISPGEECEKVFTALCQGKMIDSILECLKEWNDAPIPIC | 616 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12824240 | 12826108 | + | Hsped.06g03440.1 | Hepe06g0344 | 571719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0344 | 616 | FunFam | Phenylalanine ammonia-lyase | 163 | 472 | - | - | |
Hepe06g0344 | 616 | NCBIfam | phenylalanine ammonia-lyase | 1 | 606 | IPR005922 | GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro) | |
Hepe06g0344 | 616 | SUPERFAMILY | L-aspartase-like | 2 | 616 | IPR008948 | GO:0003824(InterPro) | |
Hepe06g0344 | 616 | CDD | PAL-HAL | 1 | 426 | IPR001106 | - | |
Hepe06g0344 | 616 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 98 | 114 | IPR022313 | GO:0016841(InterPro) | |
Hepe06g0344 | 616 | Gene3D | Fumarase/aspartase (Central domain) | 163 | 610 | - | - | |
Hepe06g0344 | 616 | PANTHER | HISTIDINE AMMONIA-LYASE | 1 | 616 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Hepe06g0344 | 616 | Gene3D | - | 429 | 550 | IPR023144 | - | |
Hepe06g0344 | 616 | Pfam | Aromatic amino acid lyase | 2 | 440 | IPR001106 | - | |
Hepe06g0344 | 616 | FunFam | Phenylalanine ammonia-lyase | 429 | 550 | - | - | |
Hepe06g0344 | 616 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Hepe06g0344 | 616 | Gene3D | - | 1 | 162 | IPR024083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g1065 | Hepe-Chr5:51629891 | Hepe06g0344 | Hepe-Chr6:12824240 | 0.0 | dispersed | |
Hepe06g0344 | Hepe-Chr6:12824240 | Hepe09g0901 | Hepe-Chr9:9037024 | 3.21e-275 | dispersed | |
Hepe06g0344 | Hepe-Chr6:12824240 | Hepe04g0943 | Hepe-Chr4:63784125 | 0.0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0344 | K10775 | - | csv:101218617 | 1160.21 |