Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0383 ATGGGCTGCATTTGCTCAAGAGGTTCCTCAGAACCAGAGGATACCAGCAGTAAGAAAGAACCTGAAATTGAAAAAGATTTGAACAAATCTTCAGTTCAGTTGGTTGCTCCTTCTCCCTCAAAAAGAGACGATTTGTTGTTAGAGATTAAGTTGTCAAGGCAGGCATCTAAAGCAAATGGGGGTTCTGTTCATAAAACAAAGGCCAATGGAGGCTCTTTCCATCGACCAAAGGAGGATAATGAATCTGTGAATAAATCTATGAAGTCTGCAAAAGCAAATAATGATAATGCTTCAGCACCTGGAAGACAGCCTGACATTTTTAAGTTAGCTAGCTTGTCTAAAGGGGCTGAAGCTGAACATGTCATGGCTGGATGGCCTTCATGGTTAGCTTCTGTTGCTGGAGAAGCCATCAAAGGGTGGGTCCCTCGCCGGGCTGACTCCTTTGAGAAGTTGGACAAAATTGGACAGGGAACTTACAGCAGTGTATATAGAGCCCGTGACCTTGAAACTGGTAAAACTGTGGCATTAAAAAAAGTGAGATTTGTAAATATGGATCCTGAAAGTGTCCGTTTTATGGCTAGGGAAATCTTTATTTTGCGCAAACTTGATCATCCAAATGTTATGAAACTTGAGGGTATAGTCACTTCCAAAATGTCGGGCAGCTTGTACCTTGTTTTCGAGTACATGGAGCATGACCTTGCAGGCCTTGCGGCAGCTCCTGGACATAAGTTTACCGAGGCTCAGATTAAATGTTATGTGCAACAATTGCTGCATGGACTCGAACACTGTCATAGTCGGGGAGTTCTGCACCGGGATATCAAAGGTTCAAATCTTCTCATTGACAATAATGGCGTGCTCAAGATTGGAGACTTTGGTCTTGCTACATTTTTTCAGCCTGATCAAAAGCAGCCATTGACAAGTCGAGTAGTGACGTTGTGGTACAGGGCACCCGAGCTTTTGCTTGGTGCTACCGATTATGGACCCGCCATAGATCTCTGGAGCTGTGGCTGTATCGTTGCTGAACTATTTGCTGGGAAACCTATTATGCCGGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTCTGTGGTTCACCATCTGAGGAGTTCTGGCGGGGAACAAAATTGCCACATGCAACTAGCTTCAAACCTCAACACCGTTATAAAAGCTGCCTTTCTGAGACATTTAAAAGTTTTCCTTCTCCAGCTCTGGCTCTTGTTAATAAACTACTTGCTATTGAACCAGATCACAGAGGATCAGCTACTTTAGCTCTCAGAAGTGAGTTTTTCAGAACGGAACCTCTCCCTTGTGACCCGTCAAGCTTACCAAAATATCCTCCGAGCAAGGAATTCGATGCTAAGATGCGAAATGAAGAAGAAAGAAAGAGAAAAGCAGAAGCTGTGAAGGGGCGTCATCCCGAATCAGTAAGAAGGGGCTCGATCAGAGACACCAAGGCAGATCCAACTCCCGAATTCAATGCTCAAGGAAACGCTACGTTAAAGGTACACCCGATCACGAAAAAGATAAATACTAAATTCAACCCTCAAGAGGACAGTGAGCCTTCGAGAGTTGCGCAGAATCGGTATGCCCACTCAACATCGATGGTGCACCCAAGCATTGCAAGTTCATGGGGTAAGCCTACTGGGGCGTCAAGAAATCGTGCAGAGTTAAAGACACAGAAATCTCAGATGCCTCAGCCATTGGGAGATTTGTCGTCAACCTCTTCTCTCATGAAGGAAGACGTAGTGTGTTCTAAGGATTCTGGAATGGGCCATGTCCAAAAGAAGAACAGAATACATTACTCAGGACCGTTGGTGCCTCCAGGGGGAAACATTGAAGAGATGCTGAAAGAGCACGAAAGACAAATCCAGCAGGCTTTTCGAAAGGCACGAGTCGACAAAGCGAAGACGAACAAGAGTTATGGCAATATGCTTTGA 1944 44.75 MGCICSRGSSEPEDTSSKKEPEIEKDLNKSSVQLVAPSPSKRDDLLLEIKLSRQASKANGGSVHKTKANGGSFHRPKEDNESVNKSMKSAKANNDNASAPGRQPDIFKLASLSKGAEAEHVMAGWPSWLASVAGEAIKGWVPRRADSFEKLDKIGQGTYSSVYRARDLETGKTVALKKVRFVNMDPESVRFMAREIFILRKLDHPNVMKLEGIVTSKMSGSLYLVFEYMEHDLAGLAAAPGHKFTEAQIKCYVQQLLHGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATFFQPDQKQPLTSRVVTLWYRAPELLLGATDYGPAIDLWSCGCIVAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEFWRGTKLPHATSFKPQHRYKSCLSETFKSFPSPALALVNKLLAIEPDHRGSATLALRSEFFRTEPLPCDPSSLPKYPPSKEFDAKMRNEEERKRKAEAVKGRHPESVRRGSIRDTKADPTPEFNAQGNATLKVHPITKKINTKFNPQEDSEPSRVAQNRYAHSTSMVHPSIASSWGKPTGASRNRAELKTQKSQMPQPLGDLSSTSSLMKEDVVCSKDSGMGHVQKKNRIHYSGPLVPPGGNIEEMLKEHERQIQQAFRKARVDKAKTNKSYGNML 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14344402 14350190 + Hsped.06g03830.1 Hepe06g0383 571758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0383 647 MobiDBLite consensus disorder prediction 1 39 - -
Hepe06g0383 647 CDD STKc_CDK9_like 148 432 - -
Hepe06g0383 647 MobiDBLite consensus disorder prediction 86 100 - -
Hepe06g0383 647 Coils Coil 450 470 - -
Hepe06g0383 647 Gene3D Phosphorylase Kinase; domain 1 135 230 - -
Hepe06g0383 647 Gene3D Transferase(Phosphotransferase) domain 1 231 472 - -
Hepe06g0383 647 FunFam probable serine/threonine-protein kinase At1g54610 135 230 - -
Hepe06g0383 647 Pfam Protein kinase domain 148 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0383 647 SUPERFAMILY Protein kinase-like (PK-like) 141 440 IPR011009 -
Hepe06g0383 647 FunFam probable serine/threonine-protein kinase At1g54610 231 472 - -
Hepe06g0383 647 PANTHER CELL DIVISION PROTEIN KINASE 147 432 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe06g0383 647 MobiDBLite consensus disorder prediction 53 102 - -
Hepe06g0383 647 MobiDBLite consensus disorder prediction 534 575 - -
Hepe06g0383 647 ProSiteProfiles Protein kinase domain profile. 148 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0383 647 MobiDBLite consensus disorder prediction 451 487 - -
Hepe06g0383 647 ProSitePatterns Protein kinases ATP-binding region signature. 154 177 IPR017441 GO:0005524(InterPro)
Hepe06g0383 647 Coils Coil 618 638 - -
Hepe06g0383 647 MobiDBLite consensus disorder prediction 440 497 - -
Hepe06g0383 647 SMART serkin_6 148 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0383 647 MobiDBLite consensus disorder prediction 71 85 - -
Hepe06g0383 647 MobiDBLite consensus disorder prediction 12 27 - -
Hepe06g0383 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0383 Hepe-Chr6:14344402 Hepe07g2089 Hepe-Chr7:65183008 2.88e-191 dispersed
Hepe01g0154 Hepe-Chr1:26638225 Hepe06g0383 Hepe-Chr6:14344402 7.61e-231 wgd
Hepe01g0473 Hepe-Chr1:61566435 Hepe06g0383 Hepe-Chr6:14344402 3.55e-42 wgd
Hepe02g1806 Hepe-Chr2:26778252 Hepe06g0383 Hepe-Chr6:14344402 9.38e-43 wgd
Hepe04g0241 Hepe-Chr4:45185773 Hepe06g0383 Hepe-Chr6:14344402 1.27e-54 wgd
Hepe06g0383 Hepe-Chr6:14344402 Hepe07g1035 Hepe-Chr7:14915394 2.96e-220 wgd
Hepe06g0383 Hepe-Chr6:14344402 Hepe07g1446 Hepe-Chr7:47922444 1.81e-116 wgd
Hepe06g0383 Hepe-Chr6:14344402 Hepe09g1602 Hepe-Chr9:46187710 2.10e-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72857 PF00069 Pkinase 5.10E-69 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0383 K08819 - csv:101208709 1123.23