Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0410 | ATGGATTGTAGAAGAAGATTTGGATTACTCTTCTGGGGTTTGTTTATTTCCTTGCTGCCTTGCATTTCTTGTTTGTTTAATCCGGTAGATAATTATCTTATTGACTGTGGATCGCCTGAGAATATCTCGGTGGGTACTCGTGTTTTCATGGCTGATAATTTGGCCTCAAAGTTGCTTTCTACCCCACAAGTTATTCTGGCTAATATCTCTTCTGTACCTGCCAGTTCTTCTAATGATTCGTCGCTGTTCGAAACGGCGAGAATCTTCACTGGAACATCAAAATTTAAGTTTCCAATCAAGAAGACGGGAAGGCACTGGATCCGTCTCTATTTCTATCCATTTGTGTTTTCTGGCTTCAATATGAGTGCTGCAAATTTTAGTGTTTCGACCCAAAACTTTGTTCTGCTGAGAGATTTGGTTGCAGAGAAAGCTATGGTCAAAGAATTCTCTGTGAATGTTGCATCAGATACTCTTGAAGTTATATTTGCTCCTGCTAATGGCTCCATTGCATATCTGAATGCCATTGAAGTTGTTTCTGTTCCTGACATTCTCATCGCTGATGAAGCCAATTTGTTGGAACCATCTGGTAAATTTCAAGGGTTGTCTACTCTGACATATGAGACAGTTGCTAGGGTTAATATGGGTGGGCCAAAAGTTGCTCCTGATGATGATCCTCTTACGCGAAATTGGGTTCCAGATGAAAGCTTTCTAGTTAATAAGAATTCTGCATCAAGTTTCTCTAACATTGCAGCTGTTAAATACAGTGCTGATGGGGCAGCGCCGGAGATTGCTCCAAATGTTGTCTACGGTAGCCTCACCGAGATGAACTCGAAGGATGATCCGAACAACAATTTCAATGTGACATGGCGGTTTAAAGTGGATCCTGAGTTTCAGTACCTTGTTCGGTTTCACTTCTGTGACATTGTGAGCAAATCTCTACACCAACTTTATTTCAATGTTTACGTTGACTCATGGCTGGTTGTTGGGGATCTAGATCTTAGTGTTCCTCTTAGTAATGCTTTGGGCACTCCATACTATATGGACTCTGTTACAGGATTGATCAAGAATGACATACTTCGTGTGAGTATTGGCCCAGCGAACTTAGCCAATGTGTATCCAAATGCCATTCTAAATGGTCTGGAAATCATGAAAATGAACAACTCTGTTGGCAGTCTTAGTGGGGAGGACTCTATAATTAGTTTTCCAGACTCGACTTCTTCAAATAAGCATGTTGGCGTCATTGTGGGCGTGAGCGTTGGGGCATTTGTTGCAGCTATATTGGTTGGAATTCTGTTTATGTTGTACAGACGAAAAGGAAAGGGAATGCATCAAGCTCCATCAAAAACGTGGGTTTCAATATCCACTGCTGGAGGAATGTCACACACTATGGGAAGTAAATACTCAAATGGCACAATCACTAGTGCTGCTTCCAACTATGGGTATCGCATACCTTTTGTAATAGTACAAGAGGCTACGAATAACTTTGATGAGAGCGGAGTTATTGGTATTGGTGGGTTTGGGAAAGTATACAAAGGAGTTTTAAATGATGGCACCAAAGTTGCTGTGAAGAGGGGTAATCCGCTTTCCCAACAAGGACTGGCAGAGTTTCAAACGGAAATCGAGATGCTATCACAGTTCCGTCATCGTCATCTTGTTTCATTGATTGGGTACTGTGATGAGAGAAATGAAATGATACTGGTGTATGAGTATATGGAACAGGGGACCGTGAAGAGTCATCTATATGGTTCTGATTTCCCTAGTTTGAGCTGGAAGGAGAGACTGGAGGTTTGCATCGGAGCCGCTAGAGGACTCCATTACCTTCACACTGGTTATGCTAAACCAGTTATTCATCGTGATGTGAAGTCTGCTAATATTTTACTCGACGAAACTCTCATGGCAAAGGTTGCTGACTTTGGGCTTTCGAAAACAGGGCCTGAAATTGACCAGACCCATGTCAGTACAGCTGTGAAAGGAAGTTTTGGGTACCTTGATCCTGAATATTTCAGGAGGCAACAACTGACTGAGAAATCAGATGTTTATTCTTTTGGAGTTGTTTTGTTTGAAGTCCTTTGTGCACGACCTGTCATAGATCCAAGCCTTCCTAGAGAAATGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAGAGGGCAGTTGAACCAAATCATTGATTCTACTCTAGTAGGAAAAGTTAAACCAACTTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTATGGAGTTGACAGGCCATCTATGGGAGACGTGTTATGGAATTTGGAGTATGCGCTTCAGCTACAAGAAGCCGTCATTGAAGTCGATCCTCAAGATAACAGTACAAATATGATCGGTGAGCTCTCTCCACAAATTAATAATTTCAATGATGATGTTGAGGCAGGTGCTTCTGCCACACGGTTCGACATTCCGGGTGTGGATGATCTTTCTGGAGTCTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTAGATGA | 2514 | 42.16 | MDCRRRFGLLFWGLFISLLPCISCLFNPVDNYLIDCGSPENISVGTRVFMADNLASKLLSTPQVILANISSVPASSSNDSSLFETARIFTGTSKFKFPIKKTGRHWIRLYFYPFVFSGFNMSAANFSVSTQNFVLLRDLVAEKAMVKEFSVNVASDTLEVIFAPANGSIAYLNAIEVVSVPDILIADEANLLEPSGKFQGLSTLTYETVARVNMGGPKVAPDDDPLTRNWVPDESFLVNKNSASSFSNIAAVKYSADGAAPEIAPNVVYGSLTEMNSKDDPNNNFNVTWRFKVDPEFQYLVRFHFCDIVSKSLHQLYFNVYVDSWLVVGDLDLSVPLSNALGTPYYMDSVTGLIKNDILRVSIGPANLANVYPNAILNGLEIMKMNNSVGSLSGEDSIISFPDSTSSNKHVGVIVGVSVGAFVAAILVGILFMLYRRKGKGMHQAPSKTWVSISTAGGMSHTMGSKYSNGTITSAASNYGYRIPFVIVQEATNNFDESGVIGIGGFGKVYKGVLNDGTKVAVKRGNPLSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILVYEYMEQGTVKSHLYGSDFPSLSWKERLEVCIGAARGLHYLHTGYAKPVIHRDVKSANILLDETLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKRGQLNQIIDSTLVGKVKPTSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIEVDPQDNSTNMIGELSPQINNFNDDVEAGASATRFDIPGVDDLSGVSMSRVFSQLVKSEGR | 837 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 15484148 | 15486661 | + | Hsped.06g04100.1 | Hepe06g0410 | 571785 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0410 | 837 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 615 | 627 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0410 | 837 | FunFam | Putative receptor-like protein kinase | 31 | 181 | - | - | |
Hepe06g0410 | 837 | PANTHER | OS07G0166700 PROTEIN | 483 | 773 | IPR045272 | GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER) | |
Hepe06g0410 | 837 | Pfam | Protein tyrosine and serine/threonine kinase | 500 | 692 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0410 | 837 | Gene3D | Phosphorylase Kinase; domain 1 | 458 | 570 | - | - | |
Hepe06g0410 | 837 | FunFam | receptor-like protein kinase FERONIA | 459 | 570 | - | - | |
Hepe06g0410 | 837 | ProSiteProfiles | Protein kinase domain profile. | 495 | 768 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g0410 | 837 | Gene3D | - | 31 | 180 | - | - | |
Hepe06g0410 | 837 | Gene3D | - | 204 | 387 | - | - | |
Hepe06g0410 | 837 | Gene3D | Transferase(Phosphotransferase) domain 1 | 571 | 788 | - | - | |
Hepe06g0410 | 837 | CDD | STKc_IRAK | 501 | 766 | - | - | |
Hepe06g0410 | 837 | ProSitePatterns | Protein kinases ATP-binding region signature. | 501 | 523 | IPR017441 | GO:0005524(InterPro) | |
Hepe06g0410 | 837 | SUPERFAMILY | Protein kinase-like (PK-like) | 472 | 766 | IPR011009 | - | |
Hepe06g0410 | 837 | FunFam | Receptor-like protein kinase FERONIA | 205 | 387 | - | - | |
Hepe06g0410 | 837 | Pfam | Malectin-like domain | 34 | 384 | IPR024788 | - | |
Hepe06g0410 | 837 | SMART | serkin_6 | 495 | 768 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g0410 | 837 | FunFam | Receptor-like protein kinase FERONIA | 571 | 786 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g2056 | Hepe-Chr4:75407206 | Hepe06g0410 | Hepe-Chr6:15484148 | 1.60e-196 | dispersed | |
Hepe06g0410 | Hepe-Chr6:15484148 | Hepe09g0097 | Hepe-Chr9:790976 | 1.65e-239 | dispersed | |
Hepe01g0857 | Hepe-Chr1:72660559 | Hepe06g0410 | Hepe-Chr6:15484148 | 7.02e-261 | transposed | |
Hepe01g1360 | Hepe-Chr1:78766674 | Hepe06g0410 | Hepe-Chr6:15484148 | 9.99e-284 | transposed | |
Hepe08g0830 | Hepe-Chr8:7511904 | Hepe06g0410 | Hepe-Chr6:15484148 | 0.0 | transposed | |
Hepe05g0997 | Hepe-Chr5:45839823 | Hepe06g0410 | Hepe-Chr6:15484148 | 6.54e-74 | wgd | |
Hepe06g0410 | Hepe-Chr6:15484148 | Hepe06g0497 | Hepe-Chr6:28751390 | 1.05e-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72858 | PF12819 | Malectin_like | 1.10E-31 | CL0202 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0410 | - | - | - | 0.0 |