Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0410 ATGGATTGTAGAAGAAGATTTGGATTACTCTTCTGGGGTTTGTTTATTTCCTTGCTGCCTTGCATTTCTTGTTTGTTTAATCCGGTAGATAATTATCTTATTGACTGTGGATCGCCTGAGAATATCTCGGTGGGTACTCGTGTTTTCATGGCTGATAATTTGGCCTCAAAGTTGCTTTCTACCCCACAAGTTATTCTGGCTAATATCTCTTCTGTACCTGCCAGTTCTTCTAATGATTCGTCGCTGTTCGAAACGGCGAGAATCTTCACTGGAACATCAAAATTTAAGTTTCCAATCAAGAAGACGGGAAGGCACTGGATCCGTCTCTATTTCTATCCATTTGTGTTTTCTGGCTTCAATATGAGTGCTGCAAATTTTAGTGTTTCGACCCAAAACTTTGTTCTGCTGAGAGATTTGGTTGCAGAGAAAGCTATGGTCAAAGAATTCTCTGTGAATGTTGCATCAGATACTCTTGAAGTTATATTTGCTCCTGCTAATGGCTCCATTGCATATCTGAATGCCATTGAAGTTGTTTCTGTTCCTGACATTCTCATCGCTGATGAAGCCAATTTGTTGGAACCATCTGGTAAATTTCAAGGGTTGTCTACTCTGACATATGAGACAGTTGCTAGGGTTAATATGGGTGGGCCAAAAGTTGCTCCTGATGATGATCCTCTTACGCGAAATTGGGTTCCAGATGAAAGCTTTCTAGTTAATAAGAATTCTGCATCAAGTTTCTCTAACATTGCAGCTGTTAAATACAGTGCTGATGGGGCAGCGCCGGAGATTGCTCCAAATGTTGTCTACGGTAGCCTCACCGAGATGAACTCGAAGGATGATCCGAACAACAATTTCAATGTGACATGGCGGTTTAAAGTGGATCCTGAGTTTCAGTACCTTGTTCGGTTTCACTTCTGTGACATTGTGAGCAAATCTCTACACCAACTTTATTTCAATGTTTACGTTGACTCATGGCTGGTTGTTGGGGATCTAGATCTTAGTGTTCCTCTTAGTAATGCTTTGGGCACTCCATACTATATGGACTCTGTTACAGGATTGATCAAGAATGACATACTTCGTGTGAGTATTGGCCCAGCGAACTTAGCCAATGTGTATCCAAATGCCATTCTAAATGGTCTGGAAATCATGAAAATGAACAACTCTGTTGGCAGTCTTAGTGGGGAGGACTCTATAATTAGTTTTCCAGACTCGACTTCTTCAAATAAGCATGTTGGCGTCATTGTGGGCGTGAGCGTTGGGGCATTTGTTGCAGCTATATTGGTTGGAATTCTGTTTATGTTGTACAGACGAAAAGGAAAGGGAATGCATCAAGCTCCATCAAAAACGTGGGTTTCAATATCCACTGCTGGAGGAATGTCACACACTATGGGAAGTAAATACTCAAATGGCACAATCACTAGTGCTGCTTCCAACTATGGGTATCGCATACCTTTTGTAATAGTACAAGAGGCTACGAATAACTTTGATGAGAGCGGAGTTATTGGTATTGGTGGGTTTGGGAAAGTATACAAAGGAGTTTTAAATGATGGCACCAAAGTTGCTGTGAAGAGGGGTAATCCGCTTTCCCAACAAGGACTGGCAGAGTTTCAAACGGAAATCGAGATGCTATCACAGTTCCGTCATCGTCATCTTGTTTCATTGATTGGGTACTGTGATGAGAGAAATGAAATGATACTGGTGTATGAGTATATGGAACAGGGGACCGTGAAGAGTCATCTATATGGTTCTGATTTCCCTAGTTTGAGCTGGAAGGAGAGACTGGAGGTTTGCATCGGAGCCGCTAGAGGACTCCATTACCTTCACACTGGTTATGCTAAACCAGTTATTCATCGTGATGTGAAGTCTGCTAATATTTTACTCGACGAAACTCTCATGGCAAAGGTTGCTGACTTTGGGCTTTCGAAAACAGGGCCTGAAATTGACCAGACCCATGTCAGTACAGCTGTGAAAGGAAGTTTTGGGTACCTTGATCCTGAATATTTCAGGAGGCAACAACTGACTGAGAAATCAGATGTTTATTCTTTTGGAGTTGTTTTGTTTGAAGTCCTTTGTGCACGACCTGTCATAGATCCAAGCCTTCCTAGAGAAATGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAGAGGGCAGTTGAACCAAATCATTGATTCTACTCTAGTAGGAAAAGTTAAACCAACTTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTATGGAGTTGACAGGCCATCTATGGGAGACGTGTTATGGAATTTGGAGTATGCGCTTCAGCTACAAGAAGCCGTCATTGAAGTCGATCCTCAAGATAACAGTACAAATATGATCGGTGAGCTCTCTCCACAAATTAATAATTTCAATGATGATGTTGAGGCAGGTGCTTCTGCCACACGGTTCGACATTCCGGGTGTGGATGATCTTTCTGGAGTCTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTAGATGA 2514 42.16 MDCRRRFGLLFWGLFISLLPCISCLFNPVDNYLIDCGSPENISVGTRVFMADNLASKLLSTPQVILANISSVPASSSNDSSLFETARIFTGTSKFKFPIKKTGRHWIRLYFYPFVFSGFNMSAANFSVSTQNFVLLRDLVAEKAMVKEFSVNVASDTLEVIFAPANGSIAYLNAIEVVSVPDILIADEANLLEPSGKFQGLSTLTYETVARVNMGGPKVAPDDDPLTRNWVPDESFLVNKNSASSFSNIAAVKYSADGAAPEIAPNVVYGSLTEMNSKDDPNNNFNVTWRFKVDPEFQYLVRFHFCDIVSKSLHQLYFNVYVDSWLVVGDLDLSVPLSNALGTPYYMDSVTGLIKNDILRVSIGPANLANVYPNAILNGLEIMKMNNSVGSLSGEDSIISFPDSTSSNKHVGVIVGVSVGAFVAAILVGILFMLYRRKGKGMHQAPSKTWVSISTAGGMSHTMGSKYSNGTITSAASNYGYRIPFVIVQEATNNFDESGVIGIGGFGKVYKGVLNDGTKVAVKRGNPLSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILVYEYMEQGTVKSHLYGSDFPSLSWKERLEVCIGAARGLHYLHTGYAKPVIHRDVKSANILLDETLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKRGQLNQIIDSTLVGKVKPTSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIEVDPQDNSTNMIGELSPQINNFNDDVEAGASATRFDIPGVDDLSGVSMSRVFSQLVKSEGR 837
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 15484148 15486661 + Hsped.06g04100.1 Hepe06g0410 571785
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0410 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0410 837 FunFam Putative receptor-like protein kinase 31 181 - -
Hepe06g0410 837 PANTHER OS07G0166700 PROTEIN 483 773 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Hepe06g0410 837 Pfam Protein tyrosine and serine/threonine kinase 500 692 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0410 837 Gene3D Phosphorylase Kinase; domain 1 458 570 - -
Hepe06g0410 837 FunFam receptor-like protein kinase FERONIA 459 570 - -
Hepe06g0410 837 ProSiteProfiles Protein kinase domain profile. 495 768 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0410 837 Gene3D - 31 180 - -
Hepe06g0410 837 Gene3D - 204 387 - -
Hepe06g0410 837 Gene3D Transferase(Phosphotransferase) domain 1 571 788 - -
Hepe06g0410 837 CDD STKc_IRAK 501 766 - -
Hepe06g0410 837 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524(InterPro)
Hepe06g0410 837 SUPERFAMILY Protein kinase-like (PK-like) 472 766 IPR011009 -
Hepe06g0410 837 FunFam Receptor-like protein kinase FERONIA 205 387 - -
Hepe06g0410 837 Pfam Malectin-like domain 34 384 IPR024788 -
Hepe06g0410 837 SMART serkin_6 495 768 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0410 837 FunFam Receptor-like protein kinase FERONIA 571 786 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g2056 Hepe-Chr4:75407206 Hepe06g0410 Hepe-Chr6:15484148 1.60e-196 dispersed
Hepe06g0410 Hepe-Chr6:15484148 Hepe09g0097 Hepe-Chr9:790976 1.65e-239 dispersed
Hepe01g0857 Hepe-Chr1:72660559 Hepe06g0410 Hepe-Chr6:15484148 7.02e-261 transposed
Hepe01g1360 Hepe-Chr1:78766674 Hepe06g0410 Hepe-Chr6:15484148 9.99e-284 transposed
Hepe08g0830 Hepe-Chr8:7511904 Hepe06g0410 Hepe-Chr6:15484148 0.0 transposed
Hepe05g0997 Hepe-Chr5:45839823 Hepe06g0410 Hepe-Chr6:15484148 6.54e-74 wgd
Hepe06g0410 Hepe-Chr6:15484148 Hepe06g0497 Hepe-Chr6:28751390 1.05e-69 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72858 PF12819 Malectin_like 1.10E-31 CL0202 Hepe PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0410 - - - 0.0