Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0424 ATGAAGTATTATCAGCAAGAATCGGCTAAGCTGCGTCAACAAATACAAATGCTTCAGAATTCCAACAGCAATCTTGTCAGGCACTTGATGGGGGATTCCTTGAGTGCTCTTACAGTGAAAGAACTGAAGCAGCTGGAGAATAGGCTTGAAAGAGCCATCACTAGAATCAGATCAAAGAAGCATGAAATGTTGCTAGCAGAAATTGAGTACCTGCAGAAAAGGGAGATCGAGCTGGAGAATGAAAATGTGTGTATTAGAACCAAGATAGCAGAAGTTGAGAGGCTTCAGCAAGCAAACATGGTGTCTGGACAAGAACTGAATGCAATTCAGGCATTGGCTTCTCGCAATTTCTTCTCTTCAAATATGATGGAAGGTGGATCTGTCTCTTTCTCTCATCAAGACAAGAAAATGCTTCATCTTGGGTGA 426 41.78 MKYYQQESAKLRQQIQMLQNSNSNLVRHLMGDSLSALTVKELKQLENRLERAITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSSNMMEGGSVSFSHQDKKMLHLG 141
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16017813 16021832 + Hsped.06g04240.1 Hepe06g0424 571799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0424 141 Coils Coil 35 81 - -
Hepe06g0424 141 ProSiteProfiles K-box domain profile. 1 95 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Hepe06g0424 141 PANTHER SERUM RESPONSE FACTOR HOMOLOG 4 110 IPR050142 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe06g0424 141 Coils Coil 1 21 - -
Hepe06g0424 141 Pfam K-box region 2 89 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0424 Hepe-Chr6:16017813 Hepe07g1821 Hepe-Chr7:60982597 3.41e-18 dispersed
Hepe06g0424 Hepe-Chr6:16017813 Hepe08g0613 Hepe-Chr8:5370745 4.36e-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0424 K09264 - csv:101208072 234.572