Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0439 | ATGGATGAGAGTTCAGGATCAAACAATGGAAACCACAGTGTTTCTTTGAATATCAAAAATGATTCTTCAGCGGATTGTGTCCCTGTACTTTTCCTTCAGAAGTTGATTGCAGAGGTGATGGGGACATATTTCTTGATATTTGCAGGGGAAGCTTCAGTAGTGGTGAATTTGAACAAAGATGGAGTCATCACTTTCCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGATCTATTCTGTTGGCCATATATCTGGTGCTCATTTTAACCCTTCTGTCACCATAGCCTTTGCCATTACCAGGAGATTTCCATGGAAAGAGGTGCCAGCATATTTGGTAGCTCAAGTTATTGGATCAACATTAGCAAGTGGGACACTTAGGCTAATATTTAATGGAATACAAGACCACTTTCCAGGAACTCTCCCAAGTGACTCATATCTGCAGACCTTTGTGATTGAATTCATAATCACATTTTACCTCATGTTTGTGGTATCTGGTGTTGCCACTGACAATAGAGCCATTGGTGAGCTTGCTGGACTCGCCGTCGGTGCTACTGTACTTCTCAATGTGATGATTGCAGGGCCAATTACAGGAGCATCCATGAATCCAGCCAGAAGTTTGGGACCTGCTATAGTATTTAAACAGTTCAAAGGGTTATGGATCTACATGACAGCACCTATTCTAGGAGCAACTGCAGGTGCGTTAGTGTATAATACCACCAGGCGGGTCTGTTCTTATCTAACCTTGTGCCTAGATATCTTTGGTCGTGGAGCTTGCATTAGCAGATCCATCCCTCCTCCTTCTAGGAAGGATTATAGGTCGACAACAGACCAGCGTTAA | 846 | 42.91 | MDESSGSNNGNHSVSLNIKNDSSADCVPVLFLQKLIAEVMGTYFLIFAGEASVVVNLNKDGVITFPGISIVWGLVVMVMIYSVGHISGAHFNPSVTIAFAITRRFPWKEVPAYLVAQVIGSTLASGTLRLIFNGIQDHFPGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLLNVMIAGPITGASMNPARSLGPAIVFKQFKGLWIYMTAPILGATAGALVYNTTRRVCSYLTLCLDIFGRGACISRSIPPPSRKDYRSTTDQR | 281 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 23712439 | 23714463 | - | Hsped.06g04390.1 | Hepe06g0439 | 571814 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0439 | 281 | NCBIfam | MIP family channel protein | 37 | 239 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | ProSitePatterns | MIP family signature. | 90 | 98 | IPR022357 | - | |
Hepe06g0439 | 281 | CDD | MIP | 33 | 240 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | SUPERFAMILY | Aquaporin-like | 29 | 243 | IPR023271 | - | |
Hepe06g0439 | 281 | PANTHER | AQUAPORIN NIP2-1 | 19 | 243 | IPR034294 | - | |
Hepe06g0439 | 281 | Pfam | Major intrinsic protein | 30 | 239 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | PRINTS | Major intrinsic protein family signature | 33 | 52 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | PRINTS | Major intrinsic protein family signature | 109 | 128 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | PRINTS | Major intrinsic protein family signature | 185 | 207 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | PRINTS | Major intrinsic protein family signature | 154 | 172 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | PRINTS | Major intrinsic protein family signature | 222 | 242 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | PRINTS | Major intrinsic protein family signature | 72 | 96 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe06g0439 | 281 | Gene3D | Glycerol uptake facilitator protein. | 7 | 246 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1226 | Hepe-Chr3:66533860 | Hepe06g0439 | Hepe-Chr6:23712439 | 4.43e-87 | dispersed | |
Hepe06g0439 | Hepe-Chr6:23712439 | HepeContig70g0010 | Hepe-ChrContig70:1765084 | 2.50e-39 | dispersed | |
Hepe06g0439 | Hepe-Chr6:23712439 | Hepe06g0442 | Hepe-Chr6:23783290 | 1.05e-163 | proximal | |
Hepe02g1303 | Hepe-Chr2:16542570 | Hepe06g0439 | Hepe-Chr6:23712439 | 2.24e-73 | transposed | |
Hepe06g1398 | Hepe-Chr6:64206685 | Hepe06g0439 | Hepe-Chr6:23712439 | 1.31e-67 | transposed | |
Hepe07g0894 | Hepe-Chr7:11521466 | Hepe06g0439 | Hepe-Chr6:23712439 | 9.46e-59 | transposed | |
Hepe02g2066 | Hepe-Chr2:50699984 | Hepe06g0439 | Hepe-Chr6:23712439 | 5.44e-59 | wgd | |
Hepe02g1979 | Hepe-Chr2:37893988 | Hepe06g0439 | Hepe-Chr6:23712439 | 4.57e-65 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0439 | K09874 | - | csv:101219297 | 388.267 |