Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0442 ATGGATGAGAGTTCAGGATCAAACAATAGAAACCACAGTGTTTCTTTTAATATCAAAGATGATTCTACCGCGGATTGTGTCCCTGTACTTTTCCTTCAGAAGTTGATTGCAGAGGTGATGGGGACATATTTCTTGATATTTGCAGGGGAAGCTTCAGTAGTGGTGAATTTGAACAAAGATGGAGTCATCACTTTCCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGATCTATTCTGTTGGCCATATATCTGGTGCTCATTTTAACCCTTCTGTCACCATAGCCTTTGCCATTACCAGGAGATTTCAATGGAAAGAGGTGCCAGCATATTTGGTAGCTCAAGTTATTGGATCAACATTAGCAAGTGGGACACTTAGGCTAATATTTAATGGAACACAAGACCACTTTCCAGGAACTCTCCCAAGTGACTCATATCTGCAGACCTTTGTGATTGAATTCATAATCACATTTTACCTCATGTTTGTGGTATCTGGTGTTGCCACTGACAATAGAGCCATTGGTGAGCTTGCTGGACTCGCCGTGGGTGCTACTGTACTTCTCAATGTGATGATTGCAGGGCCAATTACAGGAGCATCCATGAATCCAGCCAGAAGTTTGGGACCTGCTATAGTATTTAAACAGTTCAAAGGGTTATGGATCTACATGACAGCACCTATTCTAGGAGCAACTGCAGGTGCGTTAGTGTATAATACCATCAGGTTCACAGACAAACCTCTACGAGAGATCACAAAAAGCGCCTCGTTCCTCAAAAGTCGTCAAGGCACCCCATGA 801 42.7 MDESSGSNNRNHSVSFNIKDDSTADCVPVLFLQKLIAEVMGTYFLIFAGEASVVVNLNKDGVITFPGISIVWGLVVMVMIYSVGHISGAHFNPSVTIAFAITRRFQWKEVPAYLVAQVIGSTLASGTLRLIFNGTQDHFPGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLLNVMIAGPITGASMNPARSLGPAIVFKQFKGLWIYMTAPILGATAGALVYNTIRFTDKPLREITKSASFLKSRQGTP 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23783290 23784570 - Hsped.06g04420.1 Hepe06g0442 571817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0442 266 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Hepe06g0442 266 SUPERFAMILY Aquaporin-like 29 253 IPR023271 -
Hepe06g0442 266 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 Pfam Major intrinsic protein 30 239 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 NCBIfam MIP family channel protein 37 239 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 CDD MIP 33 242 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0442 266 Gene3D Glycerol uptake facilitator protein. 3 254 IPR023271 -
Hepe06g0442 266 PANTHER AQUAPORIN NIP2-1 16 247 IPR034294 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1421 Hepe-Chr2:18073403 Hepe06g0442 Hepe-Chr6:23783290 1.32e-185 dispersed
Hepe02g1422 Hepe-Chr2:18086203 Hepe06g0442 Hepe-Chr6:23783290 8.94e-184 dispersed
Hepe02g2068 Hepe-Chr2:50703899 Hepe06g0442 Hepe-Chr6:23783290 3.35e-175 dispersed
Hepe03g1225 Hepe-Chr3:66523181 Hepe06g0442 Hepe-Chr6:23783290 2.84e-161 dispersed
Hepe06g0442 Hepe-Chr6:23783290 Hepe06g1398 Hepe-Chr6:64206685 3.69e-68 dispersed
Hepe06g0439 Hepe-Chr6:23712439 Hepe06g0442 Hepe-Chr6:23783290 1.05e-163 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0442 K09874 - csv:101219297 419.468