Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0483 ATGCCTCGAAAATCAACTAGGTTAGTGGAAAAAGCTAAGGAATATTTAGAGAAGACCACAAATAGTGAAACTGCAAAATCATCCAGAACTAAGAAATATGGTGAATCTGGGGAAAACCATAAATCTTCTAGAAGGAGTCAGAAGTTGAAGCGGAATAATGAGATTAAGCTAAATGAAGTTTTGTTTCCTCCTTTATCTTCTGAGCAATCGGAGGGGAAGAAGAGAAAGACAAAGAATTTCAAGTCTGTTGGGATAAAAAAAGGGAATGGGGGATCAAGGAAGAGGGTGTATTATCAGAAAGTGGTTTTTGATGGTGGTGAATTTGAGGTTGGGGACAATGTTTATGTGAAGAGGAGAGAAAATTCAAGCTCCGATGACGAAGACCCTGAAGTTGAGGATTGCAGAGTGTGCTTTAAGTCTGGAAAGGCTATAATGATCGAGTGTGATGATTGTCTTGGTGGTTTTCATTTGAAGTGTTTGAAGCCGCCAATAAAGGAAGTCCCTGAGGGGGATTGGATTTGTGGGTATTGTGAGGCTACCAAAATTGGCAAAGAGGTTCAATTGCCAAAGCTTCCGGAGGGGAAAAAACGGGTTAGGACAATGAGGGAGAAGCTTCTGGTGGGTGACTTGTGGGCTGCACACATTGAAAGCTTATGGAAAGAAGTAAATGGTAACTACCGGTGTAAGGTTAGATGGTATATAATCCCAGAAGAGACAAAAGCTGGAAGGCAGCCACATAACTTGCGGAGAGAGCTTTATTTAACCAATGATTATGCAGATATTGAGATGGAATCTCTTCTTAGATTGTGTCAAGTCATGAATCCTAAAGACTATTATAATGCCAAGGAAGGGGATGATATCTTTTTATGCGAGTATGAATATGACGTTTGTTGGCATAGTTTCAAGCGATTAGCTGAAATTGATAAAGAAGAGGATGGTGAAGCGGTTGATAGTGACAAAGACTGGAAGTTGGACCATAATGCAGACTCTGAATCAGATGGAGATGTGGAATATGAAGAAGAGAGAGTACACATTTTACAATCTCGAATCTACTCAAGCTCAACCCATGAATTGGCTGCAAATTCAAGGAAAGGACGATTTTGTGGACTACAAAAGATAGGAGCAAAGAAGATCCCAGAGCATATAAGATGCCACAAACAGACTGAATTGGAAAGAGCAAAGGCAACCCTCATGTTGGCGTCATTACCCAAGTCTCTACCTTGTAGGAATAAAGAAATTGAGGAGATAACTACATTTATAGAAAGCGCTATTCGTGATGATCAATGTTTGGGGAGATGCTTGTACATCCATGGTGTTCCAGGAACAGGCAAGACAATGAGTGTGTTGTCAGTAATGAGGAACTTGCGGGGTAAAGTTGATGCAGGAAATATAAGACCTCATTGCTTTGTGGAGGTTAATGGTCTTAAGCTGGCATCACCAGAAAATATATACAGGGTTATATATGAAGCATTAACTGGGCATAGGGTTAATTGGAAAAAGGCTCTTCAATTGTTGACCAAACGGTTTTCAGATGTAAAGAATTGCAAAGAGGATGACCGACCTTGTATTCTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAATCAGTCAGTTCTATACAATATTCTTGATTGGCCTACAAAGCCACAAGCAAAGTTGATTGTGATAGGAATTGCAAACACCATGGACCTTCCTGAGAAGTTGCTTCCTCGAATATCAAGTCGAATGGGTATTGAAAGACTTTGTTTTGGCCCCTATAACTATCAACAACTTCAAGAAATCATTTCGAGTCGCCTTGAAGGAATCAATGCATTTGAAAAACAAGCTATTGAATTTGCATCGAGAAAGGTAGCTGCTATTTCAGGAGACGCACGTCGTGCTCTAGAGATATGCAGGCGTGCAGCTGAAATTACGGATTACCATATAAAGAAGCTGAGTTTGACTCTCAACGCTACTATGAATGCAAAAACACATGTAGGAATAGCTGAGGTGGAAGCAGCGATTCAAGAAATGTTTCAAGCACCTCATATTCAAGTGATGAAGAGTTGTTCTAAGCAGAGTAAAATCTTCTTGGCAGCTATGGTGCACGAACTTTATAAAACTGGAATGGGTGAAGCAACCTTTGAAAAGCTTGCCATGACTGTCTCGTATCTTTGTACAAGCAATGGTGAGGAATTTCCTGGATATGATGCTCTCTTGAAAGTTGGCTGTAGGCTTGGTGAATGCAGAATTATTTTATGTGAATCAGGAGCTAAACACCGGTTGCAAAAGTTGCAGCTTAATTTTCCAAGTGATGATGTTTCATTTGCACTGAAAGACAGTAAGGATCTACCTTGGTTGGCTAAGTATCTATGA 2358 40.12 MPRKSTRLVEKAKEYLEKTTNSETAKSSRTKKYGESGENHKSSRRSQKLKRNNEIKLNEVLFPPLSSEQSEGKKRKTKNFKSVGIKKGNGGSRKRVYYQKVVFDGGEFEVGDNVYVKRRENSSSDDEDPEVEDCRVCFKSGKAIMIECDDCLGGFHLKCLKPPIKEVPEGDWICGYCEATKIGKEVQLPKLPEGKKRVRTMREKLLVGDLWAAHIESLWKEVNGNYRCKVRWYIIPEETKAGRQPHNLRRELYLTNDYADIEMESLLRLCQVMNPKDYYNAKEGDDIFLCEYEYDVCWHSFKRLAEIDKEEDGEAVDSDKDWKLDHNADSESDGDVEYEEERVHILQSRIYSSSTHELAANSRKGRFCGLQKIGAKKIPEHIRCHKQTELERAKATLMLASLPKSLPCRNKEIEEITTFIESAIRDDQCLGRCLYIHGVPGTGKTMSVLSVMRNLRGKVDAGNIRPHCFVEVNGLKLASPENIYRVIYEALTGHRVNWKKALQLLTKRFSDVKNCKEDDRPCILLIDELDLLVTRNQSVLYNILDWPTKPQAKLIVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYQQLQEIISSRLEGINAFEKQAIEFASRKVAAISGDARRALEICRRAAEITDYHIKKLSLTLNATMNAKTHVGIAEVEAAIQEMFQAPHIQVMKSCSKQSKIFLAAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNFPSDDVSFALKDSKDLPWLAKYL 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26637740 26665051 - Hsped.06g04830.1 Hepe06g0483 571858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0483 785 SMART PHD_3 133 178 IPR001965 -
Hepe06g0483 785 Gene3D - 386 580 IPR027417 -
Hepe06g0483 785 FunFam Origin recognition complex subunit 1 197 389 - -
Hepe06g0483 785 ProSiteProfiles BAH domain profile. 189 305 IPR001025 GO:0003682(InterPro)
Hepe06g0483 785 FunFam Origin recognition complex subunit 1 387 585 - -
Hepe06g0483 785 SUPERFAMILY FYVE/PHD zinc finger 120 181 IPR011011 -
Hepe06g0483 785 Gene3D - 581 671 - -
Hepe06g0483 785 ProSiteProfiles Zinc finger PHD-type profile. 131 180 IPR019787 -
Hepe06g0483 785 Pfam CDC6, C terminal winged helix domain 680 771 IPR015163 -
Hepe06g0483 785 Pfam AAA lid domain 607 642 IPR041083 -
Hepe06g0483 785 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 197 IPR013083 -
Hepe06g0483 785 MobiDBLite consensus disorder prediction 1 55 - -
Hepe06g0483 785 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 183 781 IPR050311 GO:0003688(PANTHER)|GO:0005664(PANTHER)|GO:0006270(PANTHER)|GO:0033314(PANTHER)
Hepe06g0483 785 Pfam PHD-finger 134 177 IPR019787 -
Hepe06g0483 785 Pfam BAH domain 214 302 IPR001025 GO:0003682(InterPro)
Hepe06g0483 785 ProSitePatterns Zinc finger PHD-type signature. 134 177 IPR019786 -
Hepe06g0483 785 SMART BAH_4 165 305 IPR001025 GO:0003682(InterPro)
Hepe06g0483 785 Gene3D - 72 320 IPR043151 -
Hepe06g0483 785 SMART AAA_5 430 583 IPR003593 GO:0016887(InterPro)
Hepe06g0483 785 FunFam Origin recognition complex subunit 1 129 196 - -
Hepe06g0483 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 641 IPR027417 -
Hepe06g0483 785 Pfam ATPase family associated with various cellular activities (AAA) 435 579 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Hepe06g0483 785 MobiDBLite consensus disorder prediction 316 338 - -
Hepe06g0483 785 MobiDBLite consensus disorder prediction 1 86 - -
Hepe06g0483 785 FunFam Origin recognition complex subunit 1 582 674 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0483 Hepe-Chr6:26637740 Hepe09g0663 Hepe-Chr9:6277369 1.34e-31 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55728 PF00004 AAA 7.60E-20 CL0023 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0483 K02603 - csv:101214082 1352.04