Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0497 ATGAATTATTACTTTCAATGTTGCATTTCAGAGGAGAGAGCCAATAGGAAATCTTTGAAAAAGAGCATTGAGGAGTATCATGATACAAAAACTTTAGCCTCATTTGCCAATATTTCCTTCAAAACTGATAACAATAGACGACGGTGCACAACAAAGGAGAAAAAGAAGTTAGGAAAAGGAAACATCTTAGCTAAAAATTTTACTTTTCGTGAGCTATGTGTTGTGACGAATAACTTTAACCAAGAAAGTCTACTGGGGGAAGGTGGCTTTGGAAGGGTTTACAAAGGCGTCATTGAAGGCACAAAACAAGTAGCGGTGAAGCAACTTGATCGAAATGGATTTCAAGGGAATAGAGAATTTCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATACCAATCTTGTCAATTTGGTTGGGTATTGTGCTGATCCAAATCAGAGGATTTTGGTTTATGAGTACATGGCTAAAGGTTCTTTAGAGGATCATCTTCTTGATATAAGTTCAGATAAGCCAGGTTTGGATTGGAACACGAGGATAAAAATCGTCGAAGGAGCCGCAAGAGGACTCGAATACTTACACGAAACCGTCAACCCTCCGGTGATATATCGTGACTTTAAGGCTTCAAACATATTGCTGGATGAGGAATTCAATCCAAAGCTGTCTGATTTTGGTCTTGCAAAGTTAGGTCCAACTGGGGATAAATCTCATGTTTCGACTAGAGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCACTTACTGGACAATTGACTACCAAATCAGATGTCTACAGTTTTGGTGTCGTGCTTCTCGAGATCATCACTGGAAGAAGAGTTATAGACAACACAAAATCAGCAGAGGAAAAAAATTTAATTGCTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTCACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTTTGTATCAAGCTCTAGCAGTGGTAGCCATGTGTTTACAAGAGGATGCAAATACTCGGCCATTGATTAGCGACGTGGTTACAGCTCTTCAATATTTAGCTGTAAACAAGGATGTTGATGTCCATGTCGATGTCGAAGTTGACGATGAATCAGATTTGGAATCGGAATCGGGATCGGGATCGGGATCAAGATTAAGTTCATATTCAGGTTCAACTTCTCCTGATAGAAGTAGTAATAGTGGAGGTAAAAATGTTGATGGGAGGTGA 1233 39.66 MNYYFQCCISEERANRKSLKKSIEEYHDTKTLASFANISFKTDNNRRRCTTKEKKKLGKGNILAKNFTFRELCVVTNNFNQESLLGEGGFGRVYKGVIEGTKQVAVKQLDRNGFQGNREFLVEVLMLSLLHHTNLVNLVGYCADPNQRILVYEYMAKGSLEDHLLDISSDKPGLDWNTRIKIVEGAARGLEYLHETVNPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVLLEIITGRRVIDNTKSAEEKNLIAWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVVAMCLQEDANTRPLISDVVTALQYLAVNKDVDVHVDVEVDDESDLESESGSGSGSRLSSYSGSTSPDRSSNSGGKNVDGR 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28751390 28755143 - Hsped.06g04970.1 Hepe06g0497 571872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0497 410 MobiDBLite consensus disorder prediction 369 410 - -
Hepe06g0497 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0497 410 Pfam Protein kinase domain 80 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0497 410 FunFam Serine/threonine-protein kinase CDL1-like 50 154 - -
Hepe06g0497 410 Gene3D Phosphorylase Kinase; domain 1 47 154 - -
Hepe06g0497 410 FunFam Serine/threonine-protein kinase PBS1 155 369 - -
Hepe06g0497 410 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524(InterPro)
Hepe06g0497 410 Coils Coil 9 29 - -
Hepe06g0497 410 PANTHER OS07G0668900 PROTEIN 37 364 - -
Hepe06g0497 410 MobiDBLite consensus disorder prediction 378 410 - -
Hepe06g0497 410 CDD STKc_IRAK 85 353 - -
Hepe06g0497 410 ProSiteProfiles Protein kinase domain profile. 79 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0497 410 SUPERFAMILY Protein kinase-like (PK-like) 65 351 IPR011009 -
Hepe06g0497 410 Gene3D Transferase(Phosphotransferase) domain 1 155 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0497 Hepe-Chr6:28751390 Hepe07g1185 Hepe-Chr7:28179256 2.14e-220 dispersed
Hepe06g0410 Hepe-Chr6:15484148 Hepe06g0497 Hepe-Chr6:28751390 1.05e-69 wgd
Hepe06g0497 Hepe-Chr6:28751390 Hepe09g1350 Hepe-Chr9:21021532 1.55e-47 wgd
Hepe06g0497 Hepe-Chr6:28751390 Hepe09g1372 Hepe-Chr9:22427096 1.81e-126 wgd
Hepe06g0497 Hepe-Chr6:28751390 Hepe09g1372 Hepe-Chr9:22427096 1.81e-126 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72860 PF00069 Pkinase 3.90E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0497 - - - 0.0