Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0539 | ATGGACCCCACTCACTCCGATCCATCTCATGGCCGCCCTCTCCAACCTTCCTCCTCCTCCGCCGCCGCTTCCGGCGCCAAGTACAAGCTAATGTCTCCGGCCAAGCTCCCGATCTCCAGGTCCCCTTGCATTACCATCCCTCCCGGCCTCAGTCCCACTTCCTTCCTCGACTCCCCCGTTCTGCTTACCAACTTGAAGGTAGAGCCTTCTCCGACTACTGGGTCCTTTACCAAGCTTCCAATGGCACATAACTCTTCTAGCTCAGCAATTTATTCAATGACCACCATGGCTTTCTCAAATACGAATGCCTCAGATGAAGGAAAATCCAACTACTTCGAGTTCAAACCATATGTTGGACCAAATATGGTTCCTGCAGATTTGAGGCATAGGAAAGGTGAACAATCTAGAGAAGTTCAAGTTCAAGGCCATCATCAACCATTTACTGCTCCACCTATGATCAAAAGTGAGATCAATGTCATTTCAAATGATTTGAGTCGATCAACCCAGATGGATACAGTTGCCTCAGGGGCGGCTAGTGTTCCTGAAGTTGATGGCGATGATTTCAACCATAGTTTGAACACAAATACCAGGGTTCAGCCCCCACAATCTGATCCAAAAGGCAGTGGCATTCCAGTAGTTTCTGATAGGTTATCCGATGATGGATATAACTGGCGGAAGTATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCGCGTAGCTATTATAAATGTACACACCCTAACTGTGAAGTGAAAAAGCTCTTTGAACGCTCTCATGATGGACAGATAACTGATATTATCTATAAGGGTACCCATGATCATCCTAAGCCTCAGCCAAGTCGGCGATATTCTGCCAGTGCTTCTGTGAATGCTCAAGAAGATGGGTCTGATAGGCCTTCACCTTTAACTGGCCAAGATGACAAGACGTGCGGCGTATATGCTCAAACATTGCATACCATTGCGCCAAATGGAACTTCAGAACAATCCCATGTTGCAAATGATAGCATTGCCGAAGGTGCAGGAACAACTCTACCAGGCAGGAGTCATGATGAGGTTGATGACGATGACATATTCTCGAAGCGGAGGAAAATGGAACTTGGTGGTTTCGACGTCTGCCCAATGGTCAAGCCAATCAGGGAACCACGTGTTGTGGTTCAAACTCTAAGTGAGGTCGATATACTGGATGACGGGTATCGCTGGCGCAAATATGGCCAGAAGGTAGTGAGAGGAAACCCCAACCCAAGGAGTTATTACAAGTGCACAAATGTTGGATGCCCTGTTAGAAAACATGTCGAAAGAGCATCCCATGACCCAAAAGCTGTTATAACTACATATGAGGGAAAACATAATCATGACGTTCCCACTGCAAAAACTAGTAGCCATGACGTTGCAGGGCCATCGACAATTGCACCATCGAGGTATAGACTCGAAGAGAGTGACACCATAAGCCTTGATCTTGGTGTTGGCATTGGCACGGGTGGTGAGAATAGATTGAACGAATACAGGCACACATTGCATTCTCAACTTGTTGAAAACCAAACACCAAATGGAAATTTCAACTTCGAAGTAGTTCAAGAGAACTCAGCCCCAACCTATTTCGGTGTTCTCAACAGAGGTATAAACCAGCATGGATCAAGAGAGAGTTTGAGCGAAAGCCGCACCATGGAGATTGCTCCGCTAAACCATTCATCCCACCCTTATCCGCCGAGCATTGGGAGAATACTAACAGGGCCCTAA | 1737 | 46.75 | MDPTHSDPSHGRPLQPSSSSAAASGAKYKLMSPAKLPISRSPCITIPPGLSPTSFLDSPVLLTNLKVEPSPTTGSFTKLPMAHNSSSSAIYSMTTMAFSNTNASDEGKSNYFEFKPYVGPNMVPADLRHRKGEQSREVQVQGHHQPFTAPPMIKSEINVISNDLSRSTQMDTVASGAASVPEVDGDDFNHSLNTNTRVQPPQSDPKGSGIPVVSDRLSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITDIIYKGTHDHPKPQPSRRYSASASVNAQEDGSDRPSPLTGQDDKTCGVYAQTLHTIAPNGTSEQSHVANDSIAEGAGTTLPGRSHDEVDDDDIFSKRRKMELGGFDVCPMVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKTSSHDVAGPSTIAPSRYRLEESDTISLDLGVGIGTGGENRLNEYRHTLHSQLVENQTPNGNFNFEVVQENSAPTYFGVLNRGINQHGSRESLSESRTMEIAPLNHSSHPYPPSIGRILTGP | 578 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 30761365 | 30772646 | - | Hsped.06g05390.1 | Hepe06g0539 | 571914 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0539 | 578 | ProSiteProfiles | WRKY domain profile. | 213 | 277 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Hepe06g0539 | 578 | SUPERFAMILY | WRKY DNA-binding domain | 386 | 454 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | Pfam | WRKY DNA -binding domain | 395 | 452 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | Pfam | WRKY DNA -binding domain | 219 | 275 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | SUPERFAMILY | WRKY DNA-binding domain | 215 | 277 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | Gene3D | WRKY domain | 381 | 447 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | SMART | WRKY_cls | 218 | 276 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | SMART | WRKY_cls | 394 | 453 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | Gene3D | WRKY domain | 212 | 278 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 91 | 463 | IPR044810 | GO:0003700(InterPro) | |
Hepe06g0539 | 578 | MobiDBLite | consensus disorder prediction | 281 | 308 | - | - | |
Hepe06g0539 | 578 | MobiDBLite | consensus disorder prediction | 268 | 308 | - | - | |
Hepe06g0539 | 578 | FunFam | WRKY transcription factor 33 | 381 | 447 | - | - | |
Hepe06g0539 | 578 | MobiDBLite | consensus disorder prediction | 559 | 578 | - | - | |
Hepe06g0539 | 578 | ProSiteProfiles | WRKY domain profile. | 389 | 454 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe06g0539 | 578 | FunFam | WRKY transcription factor | 209 | 278 | - | - | |
Hepe06g0539 | 578 | MobiDBLite | consensus disorder prediction | 188 | 220 | - | - | |
Hepe06g0539 | 578 | MobiDBLite | consensus disorder prediction | 188 | 203 | - | - | |
Hepe06g0539 | 578 | MobiDBLite | consensus disorder prediction | 10 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g0539 | Hepe-Chr6:30761365 | Hepe06g1242 | Hepe-Chr6:62187790 | 2.56e-95 | dispersed | |
Hepe02g0291 | Hepe-Chr2:2830726 | Hepe06g0539 | Hepe-Chr6:30761365 | 1.58e-78 | transposed | |
Hepe06g0539 | Hepe-Chr6:30761365 | HepeContig66g0141 | Hepe-ChrContig66:11735812 | 3.29e-26 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55731 | PF03106 | WRKY | 3.30E-25 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0539 | - | - | - | 0.0 |