Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0543 ATGGGGAAGAAGGGTAGGTCCAAGGATCGGCCGTTGGAGGGGACTCATGAAGCTATTTCGGGTGGTCTATCAAAGAAGGTTGTCCCCGGTAAACGACTGACGGAAGTGAAGAACCATCTGAGGGCTAGGGGTGGCGCTGATCTGGGGTTGGATGGTTTCCCGGAGCTCGGCGGTAGGCGGGGGGTGCAGACGGCGGGGTGGGGCTTGGTCTCGGAGAGAGGTGGCGACGGGGGGGGGTTATGCTGCTGCTGTCAGTTGAGGAGTGTGGGTGGTGGGTTGGAGAAGGTGGTGGAAGGTAGCGGGACATCGTGCTGTGTTGTTGCGGGGGGGATGCGGCTAGACCAAGCCGGACCAGTGGGTGCGAAGATCAGGCAGTCCGCTTTGGACCTAGCTGATCCATCTGATGTACCGTTGGTCCGAACTGGGCCATCTGTTGAGAGGTCACTTCAGGCCAATATTGGGGCAATCCGAGCTGACCAATCGTGTGTTATGGATGGGCGGACTGAATGTACTATTCTGCCTGACTCGGGTATTGGGGTGTCTAGTCCTTCGAGAACTGATAATATGCTTCTTGGTGTTGGCCAGTCTCGTGGTAAAGTGTTGGGGCCCATTGGACCCAACGGTTCTGTGGGTGGTGGAGATGGTACAGTAAGGGGGTCGGGAAATCCCTCGTGGGTGTCGCTTTTTGGCTCTGCTAAGGCTTCTGAGGAACCTATGGTCTACACTCCCCTGCAGGTTATTGATGGGGTGCATGTTGTCGTTCCCCCAGCTGGTGTCTGTGAAGAAGGCATTGCGTTCTGGCAGTATTCGATAGTGGGGCAGTTTGTGGAAGGGCGTATGCCGTATGCTGTTCTCTCTCGGTTAGTTAGGCGCATTTGGGGTCGAATTGAGGAACCGACCATTTCTATGCTGGATAATGGTCTTATTATGTTTCAGTTTCGTTCTGCGGCGTCCCGCGACTGGGTGTTGTCTAACGGGCCGTGGCATATAGGAGGTCGACCCATTTTACTTCGTCAATGGTCACCAGGTATTGCTCCTGAAAATTTTGTGTTCGATTCTGTTCCTGTTTGGGTTAAGCTTTTTAATGTGTCGTTTGAGTTATGGTCCCGTAAAGGGTTGGGCACTATTGCATCAGCTGCTGGCAAACCTGTTTGTTTGGATCGGGCTACTGCAGAATGCTCCCGTCTTTCCTTTGCCAGAGTACTGGTGGAGGTCGGAGTGAATAATGAGTTGCCTTCGTCGGTTCCTGTTAAGTTGGATGGGGGGGTTGTTGTGGTTAGACTTGAGTACGCTTGGAAGCCGAAGCGGTGTGTTCATTGCCAAGTTTTTGGTCATTCTAGTTCTAATTGTAGTAGCCAAGTGGCTCAAAAGGTGTGTGAGCTCCCACCTGTGGTCCCAGATGGTGTCCCTTGTGGTTCCCTCGTCGGCAATTCTGTTGCCTCCCCGTCTATGCCTGAGGCGGGTATGGCTCGGGATCCGGTGGATCGGGGTGTGTTTTCGAGAGTTGCTAAAAACCGCAGAGTGGGTCGGGTTGCGGCCTCGTCTAGCTCCCCTCGAGTGTCTGCTCCTCGTCTAGTGCTTCCCTCTGTAAGCGACCCGTCAGTGTCTAATTCTTTTGCTGTTATTGCGCCTAGTGATACTGATGCGATGGTTGAGTCGGGTATGGTTCTTCCGTTGCCTTTGCGTGGGGAGCACAGAGTGGGTAATGTGGCTATTGTGCAGGATGGTCTGAATGTTTCTTCTCTCAAGATTTGCCTCATTTCAATCCTTTTTCTCTTCAACTTCAATTCTTCAACAACTTCCTCGTTTATGATGCCTAGTGTAATGACAGATTCATTGGAGAAGGACTCAGAGCCGTTTGTAGAAGTGAACCCGACGGGTCGGTACGGGCGGTACGGCGAGCTTCTTGGCTCGGGGGCGGTGAAGAAAGTGTACAGAGGGTTTGATCAAGAAGAAGGGATTGAGGTGGCTTGGAACCAAGTGAAACTAAGGAGCTTTTCAAATGATCCATCCATGATAGATAGGCTGTACTCGGAGGTGACATTGCTAAGAACCCTAAAGAACAACAACATCATTGCTTTGTACGACGTGTGGCTCGACAAAGTTCATGGAACCCTAAATTTCATTACTGAAGTTTGTACAAGTGGGAACCTTAGAGAGTACAGGAAGAAACATAGGCAAGTGTCTTTGAAGGCTTTGAAGAAATGGTCCAAGCAGATTCTTAAGGGTTTGCACTACTTGCATACTCATGAGCCTTGTGTTATTCATAGAGATCTCAATTGTAGCAACCTCTTTGTCAATGGAAATGTTGGCCAGGTGAAGATTGGTGACTTGGGTTTGGCAGCAACCGTGGGGAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCAGAATTCATGGCACCAGAGCTCTATGAGGAGCATTACACAGAGCTTGTGGACATATATTCATTTGGAATGTGTTTGCTCGAATTGGTCACCTTGGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTATAAGAAAGTTTCCTCAGGTATTAAGCCTCAAGCCCTTGACAAGGTCAAGGACCCTGAGGTCAAGGCTTTCATTGAGAGCTGCCTTGCTCAGTCCGAAGCTCGGCCCTCCGCTGCCGACCTCCTCCGCAACCCCTTTTTCGGGGAAATTGATGATGACGAAAACGACAACGACAATGATCATTAG 2709 50.68 MGKKGRSKDRPLEGTHEAISGGLSKKVVPGKRLTEVKNHLRARGGADLGLDGFPELGGRRGVQTAGWGLVSERGGDGGGLCCCCQLRSVGGGLEKVVEGSGTSCCVVAGGMRLDQAGPVGAKIRQSALDLADPSDVPLVRTGPSVERSLQANIGAIRADQSCVMDGRTECTILPDSGIGVSSPSRTDNMLLGVGQSRGKVLGPIGPNGSVGGGDGTVRGSGNPSWVSLFGSAKASEEPMVYTPLQVIDGVHVVVPPAGVCEEGIAFWQYSIVGQFVEGRMPYAVLSRLVRRIWGRIEEPTISMLDNGLIMFQFRSAASRDWVLSNGPWHIGGRPILLRQWSPGIAPENFVFDSVPVWVKLFNVSFELWSRKGLGTIASAAGKPVCLDRATAECSRLSFARVLVEVGVNNELPSSVPVKLDGGVVVVRLEYAWKPKRCVHCQVFGHSSSNCSSQVAQKVCELPPVVPDGVPCGSLVGNSVASPSMPEAGMARDPVDRGVFSRVAKNRRVGRVAASSSSPRVSAPRLVLPSVSDPSVSNSFAVIAPSDTDAMVESGMVLPLPLRGEHRVGNVAIVQDGLNVSSLKICLISILFLFNFNSSTTSSFMMPSVMTDSLEKDSEPFVEVNPTGRYGRYGELLGSGAVKKVYRGFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVTLLRTLKNNNIIALYDVWLDKVHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHTHEPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVGKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPQALDKVKDPEVKAFIESCLAQSEARPSAADLLRNPFFGEIDDDENDNDNDH 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31112616 31140251 + Hsped.06g05430.1 Hepe06g0543 571918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0543 902 FunFam Probable serine/threonine-protein kinase WNK1 614 711 - -
Hepe06g0543 902 Gene3D Phosphorylase Kinase; domain 1 613 711 - -
Hepe06g0543 902 MobiDBLite consensus disorder prediction 1 24 - -
Hepe06g0543 902 CDD STKc_WNK 628 888 - -
Hepe06g0543 902 Pfam Protein kinase domain 633 888 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0543 902 Gene3D Transferase(Phosphotransferase) domain 1 713 893 - -
Hepe06g0543 902 SUPERFAMILY Protein kinase-like (PK-like) 632 893 IPR011009 -
Hepe06g0543 902 Pfam Domain of unknown function (DUF4283) 283 403 IPR025558 -
Hepe06g0543 902 ProSiteProfiles Protein kinase domain profile. 630 888 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0543 902 MobiDBLite consensus disorder prediction 1 15 - -
Hepe06g0543 902 FunFam probable serine/threonine-protein kinase WNK9 713 894 - -
Hepe06g0543 902 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 616 889 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0543 Hepe-Chr6:31112616 Hepe09g0813 Hepe-Chr9:7959376 3.82e-164 dispersed
Hepe08g0398 Hepe-Chr8:3570876 Hepe06g0543 Hepe-Chr6:31112616 5.67e-153 transposed
Hepe01g0268 Hepe-Chr1:40291008 Hepe06g0543 Hepe-Chr6:31112616 1.06e-69 wgd
Hepe04g0008 Hepe-Chr4:2341371 Hepe06g0543 Hepe-Chr6:31112616 2.35e-146 wgd
Hepe04g0281 Hepe-Chr4:47743227 Hepe06g0543 Hepe-Chr6:31112616 8.70e-26 wgd
Hepe06g0543 Hepe-Chr6:31112616 Hepe09g1530 Hepe-Chr9:40128449 1.06e-107 wgd
Hepe06g0543 Hepe-Chr6:31112616 Hepe09g1353 Hepe-Chr9:21316408 2.02e-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72861 PF00069 Pkinase 2.60E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0543 K08867 - csv:101221172 536.569