Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0594 | ATGGAATGTGGAGGAACACCCGGAGGAGGAGGAGATGACTTCCATAACTATAGAAGGCAAGAGCCTAAACCAACCTCTGCGTTGAACATGTTGTTTACAACAAACAAGCCATCCTCCGCCAACAACACTCCCAACAGCAACCACCACCACCACTCAAACGGCCGAAACGACACTATTAACTCCCCCACGGCCTCGGTTGCCGCCACCAACAATGATCTGAGCCAACAATGCGTTGTGCGGGAGCAAGATCAATACATGCCGATTGCCAATGTTATACGTATCATGAGGCGAATCTTACCCTCCCATGCAAAGATATCCGATGACGCCAAGGAGACCATCCAAGAATGTGTGTCGGAGTACATTAGCTTCATCACTGGCGAGGCCAACGAGCGATGCCAACGGGAGCAACGCAAGACGGTGACGGCGGAGGATGTCCTCTGGGCCATGGGGAAGCTAGGCTTTGATGACTACATCGAGCCACTAACTGTGTTCCTCAACCGCTACCGTGAGTCGGAGAGTGATCGAATTCGCACAGATCCGATCTTGAGGCGCAATGTGGATTATGGGCCACAAGTGGGGATGATACCACCATACGGGCAATTTCAAATAGGGCATGTCCCAACGGGGATGTTCGATGCCATGGGCGGTTATTATGGAGGAGGTGGGAGCGGCGGGTCGAGCTCGGGGAATGGTAGCCAACTTTGA | 705 | 52.91 | MECGGTPGGGGDDFHNYRRQEPKPTSALNMLFTTNKPSSANNTPNSNHHHHSNGRNDTINSPTASVAATNNDLSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTDPILRRNVDYGPQVGMIPPYGQFQIGHVPTGMFDAMGGYYGGGGSGGSSSGNGSQL | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 43833629 | 43838461 | + | Hsped.06g05940.1 | Hepe06g0594 | 571969 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0594 | 234 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 86 | 149 | IPR003958 | - | |
Hepe06g0594 | 234 | Gene3D | Histone, subunit A | 73 | 185 | IPR009072 | GO:0046982(InterPro) | |
Hepe06g0594 | 234 | MobiDBLite | consensus disorder prediction | 30 | 64 | - | - | |
Hepe06g0594 | 234 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 61 | 175 | IPR027113 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0001228(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER)|GO:0016602(InterPro)|GO:0016602(PANTHER) | |
Hepe06g0594 | 234 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Hepe06g0594 | 234 | PRINTS | CCAAT-binding transcription factor subunit A signature | 113 | 131 | - | - | |
Hepe06g0594 | 234 | PRINTS | CCAAT-binding transcription factor subunit A signature | 132 | 150 | - | - | |
Hepe06g0594 | 234 | PRINTS | CCAAT-binding transcription factor subunit A signature | 151 | 169 | - | - | |
Hepe06g0594 | 234 | FunFam | Nuclear transcription factor Y subunit B-6 | 74 | 185 | - | - | |
Hepe06g0594 | 234 | SUPERFAMILY | Histone-fold | 82 | 175 | IPR009072 | GO:0046982(InterPro) | |
Hepe06g0594 | 234 | MobiDBLite | consensus disorder prediction | 30 | 49 | - | - | |
Hepe06g0594 | 234 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 116 | 132 | IPR003956 | GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe06g0594 | Hepe-Chr6:43833629 | Hepe08g0381 | Hepe-Chr8:3406020 | 7.53e-42 | dispersed | |
Hepe06g0593 | Hepe-Chr6:43822035 | Hepe06g0594 | Hepe-Chr6:43833629 | 5.46e-116 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55735 | PF00808 | CBFD_NFYB_HMF | 3.00E-25 | CL0012 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0594 | K08065 | - | csv:116402762 | 293.893 |