Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0630 ATGGCTTCCTTCTCCTCTGACGATGAACAAGAACAACAACACTACGCTTATGCTGGCCAGCTTGTTACCTTATCGGTGCTGCCGATGACACTCCAAGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAACGCCGGCCACAAGGCCGAGCTCTCTCCGGCTGAGATAGCGGCTCAGATAACCACGAAGAACCCAGATGCAGCCTCGATGGTTGATCGGATCTTGAGGCTCTTGGCCAGCCACTCGGTGGTCGGTTGCTCTGTGGCCACCGACCAATATGGGAATATGCACAGACTCTATAGCCTCACGCCCGTTTCTAAGTATTTTGTTCGTAATGAAGATGGTGTGACGTTGGGTCCGATTTTATCGTTGATTCAAGATAAAGTCTTTCTTCATAGCTGGAGTGAGCTAAAGAATGCAGTTATTGAAGGAGGAGTTCCTTTCAACAGGGCTCATGGGGGAGTTCATGCCTTTGAATACCCGAGCTTGGATCCAAGGTTTAACCAAGTTTTCAACACTGCAATGTTAAATCAAACCACTATGTGCATCAAACAAATTGTCAAGTCCTACGAGGGCTTTGCAAACCTCAAACAACTAGTTGATGTTGGTGGTGGCCTAGGGGTTACTCTTAAAATAATCACTTCTACATACCCTTCAATTAAGGGCATCAACTTCGACTTGCCTCATGTCATTCACGATGCTCCTTCCTATCCAGGTGTAGAGCATGTAGGAGGAGACATGTTTGAGAAAGTTCCAAAGGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGTGACGATCATTGTGTGAAGTTGTTGAAAAATTGCTACACCGCAATTCCAGATGATGGAAAGGTAATCGTAGTGGATGCAGTGCTTCCAATCGTGCCTGAAACCACAAATGCAGTGAAATTCACCACCCAAGGCGACGTTCTTATGATGACTCAAAATCCAGGAGGAAAGGAACGAACTCGCGATGAATTTAAAGCCCTCGCAACCAAAGCTGGGTTTAAACACATCATATTCGAGTGTTTTTCACCTCACGCCTTCATCGAACTCTCGGTCACCTCACGTCTCATCGAACTCTCGGTCACCTCACGTCTCATCGAACTCTCGGTCACTGCCGAACGTCGAAACTCTTCGTCGACCTACATTCTTGGATAA 1173 46.8 MASFSSDDEQEQQHYAYAGQLVTLSVLPMTLQAAFELGLFEILANAGHKAELSPAEIAAQITTKNPDAASMVDRILRLLASHSVVGCSVATDQYGNMHRLYSLTPVSKYFVRNEDGVTLGPILSLIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPSLDPRFNQVFNTAMLNQTTMCIKQIVKSYEGFANLKQLVDVGGGLGVTLKIITSTYPSIKGINFDLPHVIHDAPSYPGVEHVGGDMFEKVPKGDAIFMKWILHDWSDDHCVKLLKNCYTAIPDDGKVIVVDAVLPIVPETTNAVKFTTQGDVLMMTQNPGGKERTRDEFKALATKAGFKHIIFECFSPHAFIELSVTSRLIELSVTSRLIELSVTAERRNSSSTYILG 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47572215 47580503 + Hsped.06g06300.1 Hepe06g0630 572005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0630 390 FunFam Caffeic acid O-methyltransferase 111 357 - -
Hepe06g0630 390 Pfam O-methyltransferase domain 135 341 IPR001077 GO:0008171(InterPro)
Hepe06g0630 390 FunFam Caffeic acid 3-O-methyltransferase 2 110 - -
Hepe06g0630 390 Pfam Dimerisation domain 29 80 IPR012967 GO:0046983(InterPro)
Hepe06g0630 390 Gene3D Vaccinia Virus protein VP39 169 347 IPR029063 -
Hepe06g0630 390 Gene3D - 26 187 IPR036388 -
Hepe06g0630 390 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 367 IPR016461 GO:0008168(InterPro)
Hepe06g0630 390 PIRSF O-mtase 1 357 IPR016461 GO:0008168(InterPro)
Hepe06g0630 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 349 IPR029063 -
Hepe06g0630 390 PANTHER O-METHYLTRANSFERASE 16 344 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Hepe06g0630 390 SUPERFAMILY Winged helix DNA-binding domain 9 114 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0630 Hepe-Chr6:47572215 Hepe06g0635 Hepe-Chr6:48093252 1.18e-210 dispersed
Hepe06g0630 Hepe-Chr6:47572215 Hepe06g0634 Hepe-Chr6:47834097 1.71e-224 proximal
Hepe07g0025 Hepe-Chr7:351728 Hepe06g0630 Hepe-Chr6:47572215 7.72e-131 transposed
Hepe06g0137 Hepe-Chr6:4981374 Hepe06g0630 Hepe-Chr6:47572215 5.25e-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0630 K13066 - csv:101214916 569.311