Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0634 ATGGCTTCCTTCTCCTCCTCCGACGAAGAACAACAACACTTTGCTTACGCCGCGCAGCTGGCTACCTTATCGGCGCTACCGATGACACTCCAAGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAATGCCGGCCACGGAACCGAGCTCTCTGCGGTTCAGATAGTGGCTGAGATAACCACGAAGAACCCCGATGCGGCATCGATGGTTGATCGGATCCTGAGGCTTCTGGCGAGCCATTCGGTGGTCGGGTGCTCTGCAGCTACTGATGAATATGGGAGTCTGCAGAGACTCTATAGCCTCACGCCCGTTTCTAAGTATTTTGTTCGTAATGAAGATGGTGTGTCGTTGGGTCCTTCTTTATCGTTGCTTCAAGATGAAGTCTTTCTTCGTAGCTGGAGTGAGCTGAAGAATGCAGTTGTTGAAGGAGGAGTTCCTTTCAATAGGGCTCATGGGGGAGTTCATGCCTTTGAATACCCTGGCTTGGATCCAAGATTTAACAAAATTTTCAACACTGCAATGTTAAATCACACCACTATGTCCCTCAAGAAAATTGTCAAGTCCTACCAGGGCTTTGCAAACCTCAAGCAATTAGTTGATGTTGGTGGTGGCCTAGGGGCCACCCTTCAAATAATCACTTCTACATACCCTTCAATCAAGGGCATCAACTTTGACTTACCTCATGTCATTCAGAATGCTCCTTTCTATTCCGGTGTAGAACATGTAGGAGGAGACATGTTTGAGAAAGTTCCAAAGGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGCGACGATCATTGTGTGAAGTTGTTGAAAAATTGCTATGCGGCGATTCCAGATGATGGAAAGGTAATCGTAGTGGATGCAGTGCTTCCAATGGTGCCTGAGACCACAAATGCAGTGAAATGCATCTCCCAAGCCGATGTTCTTATGATGACTCAAAATCCAGGAGGAAAGGAGCGAACTCGTGATGAATTTAAAGCCCTCGCAACAAAAGCTGGGTTTAAACACATCATATACGAGTGTTTTGTGTGTAATCTTTGGATTATTGAGTTTCTAAAATGA 1077 46.15 MASFSSSDEEQQHFAYAAQLATLSALPMTLQAAFELGLFEILANAGHGTELSAVQIVAEITTKNPDAASMVDRILRLLASHSVVGCSAATDEYGSLQRLYSLTPVSKYFVRNEDGVSLGPSLSLLQDEVFLRSWSELKNAVVEGGVPFNRAHGGVHAFEYPGLDPRFNKIFNTAMLNHTTMSLKKIVKSYQGFANLKQLVDVGGGLGATLQIITSTYPSIKGINFDLPHVIQNAPFYSGVEHVGGDMFEKVPKGDAIFMKWILHDWSDDHCVKLLKNCYAAIPDDGKVIVVDAVLPMVPETTNAVKCISQADVLMMTQNPGGKERTRDEFKALATKAGFKHIIYECFVCNLWIIEFLK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47834097 47840185 + Hsped.06g06340.1 Hepe06g0634 572009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0634 358 Gene3D - 2 109 IPR036388 -
Hepe06g0634 358 FunFam Caffeic acid 3-O-methyltransferase 2 109 - -
Hepe06g0634 358 Pfam Dimerisation domain 28 79 IPR012967 GO:0046983(InterPro)
Hepe06g0634 358 PANTHER O-METHYLTRANSFERASE 15 345 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Hepe06g0634 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 356 IPR029063 -
Hepe06g0634 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168(InterPro)
Hepe06g0634 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 358 IPR016461 GO:0008168(InterPro)
Hepe06g0634 358 Pfam O-methyltransferase domain 134 340 IPR001077 GO:0008171(InterPro)
Hepe06g0634 358 SUPERFAMILY Winged helix DNA-binding domain 8 113 IPR036390 -
Hepe06g0634 358 FunFam Caffeic acid O-methyltransferase 110 358 - -
Hepe06g0634 358 Gene3D Vaccinia Virus protein VP39 110 358 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0137 Hepe-Chr6:4981374 Hepe06g0634 Hepe-Chr6:47834097 1.40e-207 dispersed
Hepe06g0254 Hepe-Chr6:9198598 Hepe06g0634 Hepe-Chr6:47834097 7.27e-200 dispersed
Hepe06g0634 Hepe-Chr6:47834097 Hepe07g0025 Hepe-Chr7:351728 3.64e-136 dispersed
Hepe06g0630 Hepe-Chr6:47572215 Hepe06g0634 Hepe-Chr6:47834097 1.71e-224 proximal
Hepe06g0634 Hepe-Chr6:47834097 Hepe06g0635 Hepe-Chr6:48093252 1.50e-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0634 K13066 - csv:101214916 573.933