Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0635 ATGGCTTCCTCCTCCTCTGACGACCACCAAGAACAACAATACTTCACTTATGCTTCACAGCTCGCTACCTCATCGGTGCTGCCGATGACACTCCAAGCAGCCTTCGAGCTCGGATTGTTTGAGATCTTGGCCAAGGCCGACCGTGAGTTCTCTCCGACTGAGATAGCGGCTGAGATCACCACAAACAACCCAGATGCGGCGTCGATGATTGATCGGATCCTGAGGCTTCTGGCGAGCCACTCAGTGGTGGGCTGCTCTGTGGCCACGGACAAAAATGGAAATCTACAGAGACTCTATAGCCTCACGCCTGTTTCTAAGTATTTTGTTCGTAATGAAGATGGTGTGTCGTTGGGTCCTGCATTATCGTTGGTTCAAGATAAACTCTTTCTTCTTAGCTGGAGTGAGCTCAAGAATGCAGTTGTTGAAGGAGGAGTTCCTTTCAACAGGGCTCATGGAGGACTTCATGCCTTTGAATACCTTGGCTTGGATCCAAGATTTAACCAAATTTTCAACAATGCAATGTTAAATCTCACCACCATGTCCATCAAGAAAATTGTCAAGTCCTACAAGGGCTTTGCAAACCTCAAACAACTAGTTGATGTTGGTGGTGGCTTAGGGGTCACCCTTCAGATCATCACTTCTACATACCCTTCAATCAAGGGCATCAACTTCGACTTGCCTCATGTCATTCAAGATGCTCCTTCCTATCCCGGTGTAGAACATGAAGGAGGAGACATGTTTGAAAAAGTTCCAAAGGGAGATGCTATTTTTCTAAAGTGGATACTTCATGATTGGAGTGACGATAATTGTGTGAAGTTGTTGAAAAATTGCTACGCTGCGATTCCAAAAGATGGAAAGGTAATCGTAGTGGACGCAGTGCTTCCAATGGTACCTGAAATCACGAGTGCAATGAAATCTATCACTCAAGCCGATGTGCATATGATGACTCAACATATAGGAGGAAAGGAGCGAACTCGCGATGAATTTAAAGCCCTCGCAATCAAAATTGGGTTCAAACACATTATATTCGAATGTTCTATATGTAATTTCTGGATTATAGAGTTTTTAAAATGA 1074 44.32 MASSSSDDHQEQQYFTYASQLATSSVLPMTLQAAFELGLFEILAKADREFSPTEIAAEITTNNPDAASMIDRILRLLASHSVVGCSVATDKNGNLQRLYSLTPVSKYFVRNEDGVSLGPALSLVQDKLFLLSWSELKNAVVEGGVPFNRAHGGLHAFEYLGLDPRFNQIFNNAMLNLTTMSIKKIVKSYKGFANLKQLVDVGGGLGVTLQIITSTYPSIKGINFDLPHVIQDAPSYPGVEHEGGDMFEKVPKGDAIFLKWILHDWSDDNCVKLLKNCYAAIPKDGKVIVVDAVLPMVPEITSAMKSITQADVHMMTQHIGGKERTRDEFKALAIKIGFKHIIFECSICNFWIIEFLK 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 48093252 48097718 + Hsped.06g06350.1 Hepe06g0635 572010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0635 357 SUPERFAMILY Winged helix DNA-binding domain 11 113 IPR036390 -
Hepe06g0635 357 Gene3D Vaccinia Virus protein VP39 109 357 IPR029063 -
Hepe06g0635 357 FunFam Caffeic acid O-methyltransferase 109 357 - -
Hepe06g0635 357 Gene3D - 2 108 IPR036388 -
Hepe06g0635 357 PANTHER O-METHYLTRANSFERASE 14 338 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Hepe06g0635 357 Pfam O-methyltransferase domain 133 339 IPR001077 GO:0008171(InterPro)
Hepe06g0635 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168(InterPro)
Hepe06g0635 357 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Hepe06g0635 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 355 IPR029063 -
Hepe06g0635 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 357 IPR016461 GO:0008168(InterPro)
Hepe06g0635 357 Pfam Dimerisation domain 29 78 IPR012967 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0309 Hepe-Chr5:3822873 Hepe06g0635 Hepe-Chr6:48093252 7.09e-47 dispersed
Hepe06g0630 Hepe-Chr6:47572215 Hepe06g0635 Hepe-Chr6:48093252 1.18e-210 dispersed
Hepe06g0635 Hepe-Chr6:48093252 Hepe07g0025 Hepe-Chr7:351728 2.69e-128 dispersed
Hepe06g0634 Hepe-Chr6:47834097 Hepe06g0635 Hepe-Chr6:48093252 1.50e-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0635 K13066 - csv:101214916 540.421