Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0649 ATGCAGTCTATTAATGGTGCTGAACATGAATCACTTTCTGGAAGGTTTCAAGTTGGTAATATAATGTTGGAGAATTTTGTTTACAAGAGCTTGAAGATTGTAATCTTCTCAAATAAACTCAACTTCCTTATGCCTTTTGGGCCTCTAGCAATTCTTGTGGATAAGTTGGCTGGGCACAATAGTTGGGTCTTCTTCCTCAGTCTATTGGGTATCATACCGTTGGCTGAGCGGTTAGGTTATGCCACAGAGCAGCTGGCTTTTTACACTGGACCTACAGTTGGGGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTGATTATATCAATTTTTGCACTGAAAAGTCAAATGATACGTGTTGTTCAGCTATCATTACTAGGCTCGATTCTGTCAAACTTGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGATTGTTTTCTATAAAAAGGAACAGACTTTTAACAAGGCAACTGCTGTTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTCTTCCTGCTCTTCTCCACTACACCCACAGTGAAGCCCATATTGGGAAGTCGGAATTGGCGCTCTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTCCAATTGAAAAGTCACACGAGTCTTTATTCTTCCGTTTATGAGGAAGAAACTCAGAGTGAAGAAAGCTCAGATGAAGAGGAAGCTTCTGAGATCTCCAAGTGGGAATCAGTTATCTGGCTATCAATTTTGACTGCTTGTATCTCTGTTCTATCAGAATACTTGGTCGATGCAATTGAAGTTGCATCTGATTCATTGAAAATCCCAGTGTCGTTTATTAGTGTTATACTGCTTCCGATTGTGGGGAATGCTGCTGAGCATGCAAGCGCTATTATGTTTGCTATGAAAGATAAGCTTGATATTTCTCTGGGTGTAGCTATCGGATCATCAACCCAGATATCTATGTTCGGGATTCCTTTCTGTGTGGTAACTGGGTGGATTATGGGACTACCAATGGACTTGAACTTTAAACTCTTCGAGACAGCGACACTTTTTATTACTGTAATAGTAGTAGCTTTCTTGCTGCAGGAAGGAACTTCAAATTACTTCAAGGGACTGATGCTTATCCTTTGTTATCTGATAGTCGCAGCTAGTTTTTTTGTGCACGTCGATCCTCCTTTACCCGAGAACAAACTGGGGAGTTTGAAGGCATAG 1236 41.1 MQSINGAEHESLSGRFQVGNIMLENFVYKSLKIVIFSNKLNFLMPFGPLAILVDKLAGHNSWVFFLSLLGIIPLAERLGYATEQLAFYTGPTVGGLLNATFGNATELIISIFALKSQMIRVVQLSLLGSILSNLLLVLGCAFFCGGIVFYKKEQTFNKATAVVNSGLLLMAVMGLLLPALLHYTHSEAHIGKSELALSRFSSCIMLLAYAAYLFFQLKSHTSLYSSVYEEETQSEESSDEEEASEISKWESVIWLSILTACISVLSEYLVDAIEVASDSLKIPVSFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVTGWIMGLPMDLNFKLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPPLPENKLGSLKA 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49068851 49077748 - Hsped.06g06490.1 Hepe06g0649 572024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0649 411 Gene3D - 91 232 IPR044880 -
Hepe06g0649 411 Gene3D - 238 395 IPR044880 -
Hepe06g0649 411 NCBIfam calcium/proton exchanger 44 394 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Hepe06g0649 411 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 399 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
Hepe06g0649 411 Pfam Sodium/calcium exchanger protein 251 393 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0649 411 Pfam Sodium/calcium exchanger protein 62 217 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0649 411 FunFam Vacuolar cation/proton exchanger 239 395 - -
Hepe06g0649 411 FunFam Vacuolar cation/proton exchanger 91 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0092 Hepe-Chr5:989793 Hepe06g0649 Hepe-Chr6:49068851 7.48e-85 dispersed
Hepe06g0649 Hepe-Chr6:49068851 Hepe08g0368 Hepe-Chr8:3303315 2.22e-195 dispersed
Hepe06g0649 Hepe-Chr6:49068851 Hepe04g0753 Hepe-Chr4:61536010 4.21e-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0649 K07300 - csv:101205761 593.193