Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0678 ATGAAGGGTGTAATCTCAATATTCGAAAATGGAAGAAAACAACTCCACACAACAAGATCATGGGACTTCATGGGTTTGTCTCAAAAGGTTAGTCGAGTTCCATCTGTGGAAAGCGACATCATTGTCGGAGTGTTGGACACAGGCATTTGGCCGGAATCCCTTAGTTTCCTCGACGATGGATATGGCCCACCACCTACCAAATGGAAGGGCAGTTGTGAACTCTCAGCCAATTTCTCTTGCAACAATAAAATCGTTGGCGCTCGATCATACCGCAGTGATGGTTTGTATCCAGCAAACGATATCCGAGATCCAAGAGATACAAATGGCCATGGGACACACACAGCATCGACCGTTGCAGGTGGGTTGGTCGGACGAGCGAGTATGCTTGGTCTCGGTTTAGGCACAGCAAGGGGTGGGGTCCCGTCAGCACGGATCGCCGCCTACAAAGTATGTTGGTCCGATGGTTGCTACGACGCAGATATTCTTGCTGCATTCGACGACGCCATTGCCGACGGGGTTGACATCATCTCTTTCTCCATCGGAGGAAGCACGCCGGTAGATTACTTCAATGACTCCATGGCCATCGGAGCTTTCCATGCAATGAAGAAGGGAATTCTTACGTCAATGTCCGCCGGCAACGACGGTCCTGGCTCTTTCACAATTAGAAACTTCTCGCCTTGGTCTCTATCCGTGGCCGCCAGCACTACCGATAGGAAATTTTTGACTGGAGTTCAACTTGGAGATGGAAGAAAATTCAATGGAGTTACCATCAATACTTTTGATCTAAATGGAACACAATATCCATTGGTGTATGCGGGAGACATACCAAATGTAATTGCTGGCTTCAATGGATCCATGTCTAGATTTTGCTTGGAAAACTCTTTGGACAAAGAGTTGGTGAAGGGTAAAATTGCTTTGTGTGATTCTTTTGTGTCTCCGAGACAAGTGGGTTCTTTCAAAGATGCAATTGGGATTATAATGCAAGACACAACTCCAAAAGATCTCACCTTCCCTTTTCCCTTGCCTGCCTCCCACCTTGGCACAAAGGATGGAGCTTTCATTTCTTCTTATCTCAACTTAACTAGCCTTCCAACAGCAACTATATTAAAAAGCATACAAGGGAAGTATAAATCAAGCCCTTTTGTTGCATCTTTCTCTTCAAGGGGTCCAAATCCAATAACTCCTGATATTCTTAAGCCAGATCTGACTGGTCCAGGAGTGGAAATTCTTGCAGCATGGTCTCCAATGGGTCCACCTTCAGGAGCCGAAGATGATAATAGAAATATATTTTATAATATAATTTCAGGAACTTCAATGTCTTGCCCACATGCTACCGCAGTTGCTGCATATGTTAAATCATTCCACCCTTCTTGGTCTCCTGCTGCCCTTAAATCAGCACTTATGACAACAGCATTTCCCATGAAAGCTGAACTTAACCCAGATGCAGAATTCGCATATGGTTCTGGCCATATAAATCCGCTACGAGCAGTGAATCCTGGATTGATCTACAATGCTACTGAAAATGATTATGTTAGGTTTCTATGTGGTCAAGGTTATAGCACAAACTTGCTCCAACAAGTCTCTCAAGATAATAGTATTTGTTCTTCCAACAATACCGACACGGTTTTCGATCTAAACTATCCTTCGTTTGCTCTTTCCACATCCATCTCAACCTCAATCACTCAAACTTACAAAAGAAGGCTCACAAATGTTGGCTCCAGAAATTCGACATATAAAGCCACAGTTATTGCTCCTTTAGGGCTTCAAATTACAGTGAATCCTTCTATTCTTTCATTCAAGGCTTTGGGAGAGGTCAAAATCTTTGAGCTTACAATTCAAGGAAAAATCAGTGTCAGCATTGCTTCGGCTTCCTTGGTGTGGGATGATGGTCAACACAAAGTCAGGAGTCCTATAACAGTGTTTGATTCTAATGCTTTCATTAATTAG 1947 43.66 MKGVISIFENGRKQLHTTRSWDFMGLSQKVSRVPSVESDIIVGVLDTGIWPESLSFLDDGYGPPPTKWKGSCELSANFSCNNKIVGARSYRSDGLYPANDIRDPRDTNGHGTHTASTVAGGLVGRASMLGLGLGTARGGVPSARIAAYKVCWSDGCYDADILAAFDDAIADGVDIISFSIGGSTPVDYFNDSMAIGAFHAMKKGILTSMSAGNDGPGSFTIRNFSPWSLSVAASTTDRKFLTGVQLGDGRKFNGVTINTFDLNGTQYPLVYAGDIPNVIAGFNGSMSRFCLENSLDKELVKGKIALCDSFVSPRQVGSFKDAIGIIMQDTTPKDLTFPFPLPASHLGTKDGAFISSYLNLTSLPTATILKSIQGKYKSSPFVASFSSRGPNPITPDILKPDLTGPGVEILAAWSPMGPPSGAEDDNRNIFYNIISGTSMSCPHATAVAAYVKSFHPSWSPAALKSALMTTAFPMKAELNPDAEFAYGSGHINPLRAVNPGLIYNATENDYVRFLCGQGYSTNLLQQVSQDNSICSSNNTDTVFDLNYPSFALSTSISTSITQTYKRRLTNVGSRNSTYKATVIAPLGLQITVNPSILSFKALGEVKIFELTIQGKISVSIASASLVWDDGQHKVRSPITVFDSNAFIN 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50723383 50725818 + Hsped.06g06780.1 Hepe06g0678 572053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0678 648 PRINTS Subtilisin serine protease family (S8) signature 106 119 IPR015500 -
Hepe06g0678 648 PRINTS Subtilisin serine protease family (S8) signature 435 451 IPR015500 -
Hepe06g0678 648 PRINTS Subtilisin serine protease family (S8) signature 37 56 IPR015500 -
Hepe06g0678 648 Pfam Fibronectin type-III domain 544 640 IPR041469 -
Hepe06g0678 648 Gene3D Peptidase S8/S53 domain 39 510 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe06g0678 648 Pfam Subtilase family 38 487 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Hepe06g0678 648 SUPERFAMILY Subtilisin-like 24 498 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe06g0678 648 CDD PA_subtilisin_like 244 368 - -
Hepe06g0678 648 Gene3D - 237 375 - -
Hepe06g0678 648 ProSiteProfiles Serine proteases, subtilase domain profile. 20 497 - -
Hepe06g0678 648 ProSitePatterns Serine proteases, subtilase family, serine active site. 436 446 IPR023828 -
Hepe06g0678 648 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 638 IPR045051 -
Hepe06g0678 648 CDD Peptidases_S8_3 13 471 IPR034197 -
Hepe06g0678 648 FunFam Subtilisin-like protease SBT1.5 39 253 - -
Hepe06g0678 648 Gene3D - 514 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0678 Hepe-Chr6:50723383 Hepe08g0148 Hepe-Chr8:1271663 3.12e-187 dispersed
Hepe06g0677 Hepe-Chr6:50705519 Hepe06g0678 Hepe-Chr6:50723383 0.0 tandem
Hepe06g0678 Hepe-Chr6:50723383 Hepe06g0679 Hepe-Chr6:50809419 0.0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0678 - - - 0.0