Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0686 ATGCCTTCATGGTGGGGGAAGTCATCATCAAAAGAAGTAAAGAAGAGCAAGGAAAGTTTTATCGACACATTGCAGCGGAAACTTAGAACTGCTGATGGTAAAACAAACAGCAGATCAGGAGGGTCTCCAAGAAATTGTAACGACACAATTTCCGAGCAGGGATCTCGATCTCCTATTCTTTCAAGATCAGTTTCACCTTCCAAACAAGTTTCAAGATGTCAAAGCTTTTCCGAAAGGCCACAAGCACAACCTCTTCCACTTCCTGGTGTGCAACCACCAATTGTAAGTCGCACAGACTCCGGGATTAGTATTTCACCAAAACCAAGATCTGATAGGGGCTCCAAGCCATCATTATTTCTACCGCTCCCAAGACCAGCATGCATCCGTAGAAGATCAAACCATGCAGATTTAGATGCAGATGTTGGTGTTGGCTCAGTGTCCAGTGAGAGCTCAAATGATAGCACGGATCTATCGGATTCACGCCATCGTAGTCCTCGGGCAACTGACTATGATCTTGGGACTAAAACTGCTGCAGGCAGTCCTTCCAGTGTCATTGTCAGGGATCAGTCTTCTACAGTCACCCACCCAAGCTCACGAGAGGCTAGAAAACCAGCAAATATCTCATTGAGCAATCACATTTTCTCTACATCACCCAAGCGGAGGCCTTTAAGCAGTCATGTGCCAAATCTGCAGGTTCCATATCATGGGAATTTATGCTTTGCTCCAGACAGTTCAATGTCAAGTCCTTCTAGAAGTCCCATAAGGGCATTTAGCACAGAGCAAGTTATTAATAATGCTGTTAGTGTTGGAAAGTTCTCTATGGATGTCACTTTTCCTGGGTCAGGCCATTGTTCTAGTCCTGGTTCTGGTTACAATTCTGGGCATAATTCGATGGGTGGTGATTTGTCAGGGCAGTTATTTTTGCAACAAAGCCGGGGTAGCCCTGAATATTCCCCAGCACCCAGTCCCAGAATGACCAGCCCTGGCCCTAGCTCCAGAGTCCATAGTGGTGCAGTGACCCCAATTCATCCTAGGGCGGGAGGGATACCGGCTGAGTCACAGACAAGCTGGCCTGATGAAAAGCAAACTCACCGCTTGCCTCTACCTCCGGTTTCAATTTCCAATGCTCCTTTTTCGCATTCCAATTCAGCTGCAACATCTCCCTCTGTTCCAAGAAGTCCTGGAAGGGCCGATAATCCACTAAGCCCGGGATCCCGTTGGAAAAAGGGGAAGCTTTTGGGTAGGGGTACTTTTGGGCATGTGTATGTTGGTTTCAACAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACATTATTTTCCGATGATGCCAAGTCCAAGGAGAGTGCCAAGCAATTAATGCAAGAAATTACCTTGTTGAGTCGCTTACGGCATCCAAATATTGTGCAGTATTATGGATCTGAAACGGTTGGCGACAGGCTTTACATTTACCTTGAATATGTATCTGGTGGCTCTATTTACAAGCTTCTCCAGGATTATGGACAGCTTGGAGAATCAGCACTTCGTAGTTATACTCAGCAAATATTGTCTGGGCTTGCATATTTACATGCTAAAAGTACTGTTCACAGGGATATCAAAGGAGCAAATATACTTGTTGATCCCACCGGGCGTGTTAAGTTGGCCGACTTTGGGATGGCAAAACATATCACTGGGCAATCATGCCCTTTGTCCTTTAAAGGCAGCCCATACTGGATGGCACCCGAGGTTATCAAAAACTCAAATGGTTGTAACCTTGCGGTTGATGTTTGGAGCCTTGGATGCACTGTTTTGGAAATGGCAACAACAAAACCTCCTTGGAGTCAATATGAAGGAGTCGCTGCAATGTTTAAGATTGGCAACAGCAAAGAACTTCCTGAGATCCCGGATCACCTTTCACATGATGGAAAAGACTTTGTTAGACAATGTCTACAACGAAATCCAGCTCATCGTCCTACGGCTGCTCAGCTTTTGGAGCATCCTTTTGTCAAACATGCTGCACCTCTCGAAAGACCGATTTTGGGTTCTGAACATTCAGATCCAACTCCAGGAATTACAAATGGAGTAAGAACTCTGGGTATTGAGCAGGGAAGGAATCCCAGCTTCTTGGATTCTGATAGATCTGCAGCTCATTCATCTAGACTCTCAACAGCTGCTTTTCATTCCAGTGAAATTCATATTCCAAGGAACCTATCGTGCCCTGTTTCGCCCATTGGAAGCCCTCTGGTGCGCTCACGGTCACCACAACATCCCAGTGGAAGAATGTCTCCATCGCCCATCTCTAGCCCTCGGAACATGTCAGGCGCATCGACTCCTCTCACGGGAGGAAGCGGTGCCATTCCACACCAGCACCTCAAACAATCACTGTACCTACAGGAGGGTTTTGGGAGCTTGCCAAAGCCTTCCATAGGTCCCTATAGTAATGGCCCTTCCTATCACGATACGAACCCCGACATCTTTCAGGGGATGCAGCCAGGCTCTCATATCTTCTCTGAGCAGTTTGGAAAGCCTGCCTGGGAGTTGTACGATGGGCAGGCGGTCTTGGCTGATCGTGTTTCTAGGCAGCTGCTGAGTGAACACATAACAACTCCCTCCCTGGATTTAAGTCCGAGCTCTCTTTTGACCAACCGCAGATAG 2637 46.95 MPSWWGKSSSKEVKKSKESFIDTLQRKLRTADGKTNSRSGGSPRNCNDTISEQGSRSPILSRSVSPSKQVSRCQSFSERPQAQPLPLPGVQPPIVSRTDSGISISPKPRSDRGSKPSLFLPLPRPACIRRRSNHADLDADVGVGSVSSESSNDSTDLSDSRHRSPRATDYDLGTKTAAGSPSSVIVRDQSSTVTHPSSREARKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYHGNLCFAPDSSMSSPSRSPIRAFSTEQVINNAVSVGKFSMDVTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPAPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPAESQTSWPDEKQTHRLPLPPVSISNAPFSHSNSAATSPSVPRSPGRADNPLSPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYYGSETVGDRLYIYLEYVSGGSIYKLLQDYGQLGESALRSYTQQILSGLAYLHAKSTVHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDVWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPEIPDHLSHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKHAAPLERPILGSEHSDPTPGITNGVRTLGIEQGRNPSFLDSDRSAAHSSRLSTAAFHSSEIHIPRNLSCPVSPIGSPLVRSRSPQHPSGRMSPSPISSPRNMSGASTPLTGGSGAIPHQHLKQSLYLQEGFGSLPKPSIGPYSNGPSYHDTNPDIFQGMQPGSHIFSEQFGKPAWELYDGQAVLADRVSRQLLSEHITTPSLDLSPSSLLTNRR 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50954140 50958729 - Hsped.06g06860.1 Hepe06g0686 572061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0686 878 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524(InterPro)
Hepe06g0686 878 Gene3D Transferase(Phosphotransferase) domain 1 405 680 - -
Hepe06g0686 878 FunFam Mitogen-activated protein kinase kinase kinase 405 687 - -
Hepe06g0686 878 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0686 878 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0686 878 MobiDBLite consensus disorder prediction 674 709 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 281 409 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 34 81 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 175 203 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 139 203 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 736 781 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 742 777 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 155 169 - -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 281 317 - -
Hepe06g0686 878 SMART serkin_6 407 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0686 878 MobiDBLite consensus disorder prediction 25 123 - -
Hepe06g0686 878 CDD STKc_MEKK1_plant 406 663 - -
Hepe06g0686 878 SUPERFAMILY Protein kinase-like (PK-like) 405 751 IPR011009 -
Hepe06g0686 878 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 40 669 IPR050538 -
Hepe06g0686 878 MobiDBLite consensus disorder prediction 374 393 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1189 Hepe-Chr2:14944239 Hepe06g0686 Hepe-Chr6:50954140 4.16e-57 dispersed
Hepe04g1230 Hepe-Chr4:67672707 Hepe06g0686 Hepe-Chr6:50954140 8.10e-106 dispersed
Hepe06g0686 Hepe-Chr6:50954140 Hepe10g0698 Hepe-Chr10:9319327 5.75e-100 dispersed
Hepe04g1109 Hepe-Chr4:65970456 Hepe06g0686 Hepe-Chr6:50954140 1.54e-141 transposed
Hepe07g0143 Hepe-Chr7:1310318 Hepe06g0686 Hepe-Chr6:50954140 0.0 transposed
Hepe10g1099 Hepe-Chr10:43535772 Hepe06g0686 Hepe-Chr6:50954140 3.47e-17 wgd
Hepe02g1784 Hepe-Chr2:25901475 Hepe06g0686 Hepe-Chr6:50954140 2.69e-30 wgd
Hepe03g0766 Hepe-Chr3:21631136 Hepe06g0686 Hepe-Chr6:50954140 7.35e-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72863 PF00069 Pkinase 3.70E-72 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0686 K20717 - csv:101222716 1633.23