Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0718 ATGCTTGATGAACAGCAAGCAGCAGATCTTGCAAAATTTCCAAACGTCGTTTCGGTTTTTGAATGTCAAGCAAGAAAATTACACACAACACGATCATGGGACTTTCTCGGAATGGAAAAACATGAAGAAATTCCGTCGAACTCCATTTGGAATGTTGCGAGGTTTGGCGAAGATACGATCATAGCTAACTTTGACACAGGCGTTTGGCCAGAAGTTAGGAGCTTTAGTGATGATGGGTATGGTCCTGTCCCCTCAAGGTGGAAGGGAACTTGTCAAAGTGATACAGACCCCAACTTCCATTGCAACAGGAAGTTGATTGGAGCAAGATTCTTCAACAAAGGCTATGGTAAACTCAGTGTTACCTTCAATTCTTCAAGAGACAATGACGGTCATGGAACCCACACTTTAGCCATAGCTGGTGGCAATTTTGTCTCTGGAGCTAACGTTTTGGGCATGGGCAATGGAACAGCCAAAGGCGGCTCCCCTCGAGCCCGCGTCGCATCCTACAAGGTTTGTTGGCCAGAAGAAGGTGGTGAGTGTATGGACCCAAATAACTTGGCTGCCTTTGAAGCTGCAATTAGCGATGGCGTTGACGTTATCTCGATTTCCGTCGGTGGAGAGCCCAAAGAGTTTTTTAGTGATGCACTCTCTGTAGGAGCCTTCCATGCAGTTCAGCATGGTATTGTTGTTGTTTGCTCGGCTGGGAACTTGGGCCCAACTCCTGGGACGGTATCAAATGTGTCGCCATGGGTTCTAACTGTTGGAGCCAGTACCATGGATAGGGATTTCACCAATTTTGTGGTCCTGGGGAACAAGAAGAAACTCAAGGGTACAAGCTTTTCTTCTAAGGCATTGCCATTTAACAAGTTCTACCCTTTAATCAATGCTGTGGATGCAAAAGCCAACAATGTCTCTAATAGTGATGCTGAAGTTTGTGATCAGGGATCGCTCGATCCCACAAAGTTGACCGGGAAGATTGTGGTTTGCCTTCGAGGGGGTATTTCAAGAGTGTCCAAGGGCTATGTAGTTTCCCAAGCAGGGGCTGTTGGGATGATTTTGATTAACGATAAGGAAAGTGGGAATGCAATTATAACTGATCTGCACGTCCTTCCAGCTTCCCATGTACCCTACAACGACAGCATATTCATCTTTCAATACATCAATTCTACAAAGACACCAATGGCTTACATCAGTTCTGTGATAACAGAACTAGAAATCAAACCATCCCCAGTAATGGCTGATTTCTCATCAAGAGGCCCCAATACAATCGAGGAGTCAATCCTCAAGCCAGATATAACAGCACCAGGTGTGAATATAATTGCGGCTTACCCCGATAGAATACCATTGACAGAATTATCGCTTGACAATCGTCGATCTCCTTTTAAGGTAGATTCTGGCACATCCATGGCCTGCCCCCATGTTGCTGGCATTGTAGGCCTTCTCAAAACCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACCACAGCCAAAACAAGAGACAACGACTTACATCCAATTCTAGACTCCATGGGACTCAAAGCAACCCCATTGGCGTACGGCGCCGGACATGTTCATCCAAACAGTGCGATGGACCCTGGCCTGGTTTACGACATTACAATCGACGATTACCTAAATTTCTTGTGCGCTCGAGGCTACAATGCAAAGCAAATCCAGCAAATATCGAAGAAGTTCTTCGTTTGCGATCGATCATTCAAAGTGACGGATCTGAATTACCCATCGATCTCAGTGACGGGTCTGAAAACGGGCCCTGTGACGATCAATCGAAAGGTGAAGAACGTGGGAAGTCCAGGGACGTACGTTGCTGGAGTGAAGGCGCCTATGGAAATTTCAATCGGCGTTGAGCCAAGTACATTGGAATTTACTGCCATGGATGAAGAGAAGAGCTTCAAGGTTGTGTTGCAGAGCACTGGAAAGGGAAATCAACAGGGTTATGTGTTTGGGGAATTGGCATGGTCTGATGGCAAACACAATGTTATGAGCCCCATTGCTGTGAATTTAGGGAAATAG 2043 46.01 MLDEQQAADLAKFPNVVSVFECQARKLHTTRSWDFLGMEKHEEIPSNSIWNVARFGEDTIIANFDTGVWPEVRSFSDDGYGPVPSRWKGTCQSDTDPNFHCNRKLIGARFFNKGYGKLSVTFNSSRDNDGHGTHTLAIAGGNFVSGANVLGMGNGTAKGGSPRARVASYKVCWPEEGGECMDPNNLAAFEAAISDGVDVISISVGGEPKEFFSDALSVGAFHAVQHGIVVVCSAGNLGPTPGTVSNVSPWVLTVGASTMDRDFTNFVVLGNKKKLKGTSFSSKALPFNKFYPLINAVDAKANNVSNSDAEVCDQGSLDPTKLTGKIVVCLRGGISRVSKGYVVSQAGAVGMILINDKESGNAIITDLHVLPASHVPYNDSIFIFQYINSTKTPMAYISSVITELEIKPSPVMADFSSRGPNTIEESILKPDITAPGVNIIAAYPDRIPLTELSLDNRRSPFKVDSGTSMACPHVAGIVGLLKTLNPKWSPAAIKSAIMTTAKTRDNDLHPILDSMGLKATPLAYGAGHVHPNSAMDPGLVYDITIDDYLNFLCARGYNAKQIQQISKKFFVCDRSFKVTDLNYPSISVTGLKTGPVTINRKVKNVGSPGTYVAGVKAPMEISIGVEPSTLEFTAMDEEKSFKVVLQSTGKGNQQGYVFGELAWSDGKHNVMSPIAVNLGK 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 52480191 52499710 - Hsped.06g07180.1 Hepe06g0718 572093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0718 680 FunFam Subtilisin-like protease SBT1.5 58 273 - -
Hepe06g0718 680 CDD PA_subtilisin_like 267 397 - -
Hepe06g0718 680 Pfam Fibronectin type-III domain 580 676 IPR041469 -
Hepe06g0718 680 CDD Peptidases_S8_3 26 501 IPR034197 -
Hepe06g0718 680 ProSitePatterns Serine proteases, subtilase family, serine active site. 466 476 IPR023828 -
Hepe06g0718 680 FunFam Subtilisin-like protease SBT1.5 552 679 - -
Hepe06g0718 680 ProSiteProfiles Serine proteases, subtilase domain profile. 32 535 - -
Hepe06g0718 680 Gene3D - 552 678 - -
Hepe06g0718 680 SUPERFAMILY PA domain 317 389 IPR046450 -
Hepe06g0718 680 SUPERFAMILY Subtilisin-like 27 539 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe06g0718 680 Gene3D Peptidase S8/S53 domain 58 548 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe06g0718 680 Pfam Subtilase family 58 504 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Hepe06g0718 680 Pfam PA domain 308 379 IPR003137 -
Hepe06g0718 680 Gene3D - 260 404 - -
Hepe06g0718 680 FunFam subtilisin-like protease SBT1.5 260 404 - -
Hepe06g0718 680 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 674 IPR045051 -
Hepe06g0718 680 PRINTS Subtilisin serine protease family (S8) signature 127 140 IPR015500 -
Hepe06g0718 680 PRINTS Subtilisin serine protease family (S8) signature 56 75 IPR015500 -
Hepe06g0718 680 PRINTS Subtilisin serine protease family (S8) signature 465 481 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0718 Hepe-Chr6:52480191 Hepe07g1412 Hepe-Chr7:46708259 5.78e-245 dispersed
Hepe06g0715 Hepe-Chr6:52371135 Hepe06g0718 Hepe-Chr6:52480191 0.0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0718 - - - 0.0