Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0764 ATGAGCTTCAAAAGAGACCTCGAGCTTGTCGTCTTCGTTTTCTCTGCAGTCTCCTGGTTTGCAGCGACTTTTTATCTGGTCATGTCGGAGCCGATCAAAGACAAGGAAGCTTTGCTTAACTTTCTCAACAAGATGGAACACTCACACTCGCTCAATTGGAAGAATAACACTTCTTTGTGCAAAGAATGGATGGGAGTTCAATGCAACAATGATGAATCGCAAGTCGTAGCTCTGCGATTGGCTGAATTTGGCTTACTCGGTTCGATCCCGATCAACACTCTCGGTCTTCTATCGGCACTTGAAACTCTAATCCTTGGATCGAATTTCATATCAGGGCCTTTCCCTTCCGACTTCCAAAAGCTGAGAAATCTCAACTCACTCTACTTACAAAACAACAAGTTTTCTGGTCCATTGCCATTGGATTTCTCAATATGGAAGAATCTCAAAATCATTGATTTGTCCAACAATGCCTTCAATGGGAGCATCCCTCGCTCGATCTCGAACACGACGCATCTAACGATATTAAACCTTGCCAATAACTCACTCTCTGGTAGGATTCCAGACCTCCACCTTCCTAGTTTGCAAGAGTTGGATCTTTCAAACAACTATCTCACGGGGCATGTCCCTCAGTCCCTTCAAAGATTTCCAAGTCGGGCATTCTCCGGTAACAACCTCGTCCCAGAAAATGCCGTTCCTCCCGCTCGTCCTGGACCATCGCCCAATGCTCAACCATCAAAGAAAGGCACTACAACACTTGGCGAAGCAGCAATTCTTGGTATTATAATTGGAGGTTCTGCAATGGGGCTAGTTATAGCAGCCATTTTGATGGTTATGTGCTGCTCAAACAGAGGAGTAATAATAAAAAGCAAAGCCTCATCAAAACTGGACAAACCAGAACTGTTTGTGAAGAAAAAGGCGTCTGAGACACAAAGCAACAGTCTCAAGTTTTTTCAGAGTCACGGCCTTGAGTTTGACTTGGAGGACTTGTTGAGGGCGTCTTCGGAGGTGCTAGGGAAGGGGACGTCGGGGACGACGTATAAGGCAACGTTAGAAGACGGTAATGCCGTGGCAGTGAAGAGGTTGAAAGAAGTGATTGTTTCAAAGAAGGAATTTGAGCAGCAGATGGAGGTGATTGGGAGCATTGAACACGAAAATGTGTGTGCTTTAAGGGCATATTACTATTCAAAGGATGAGAAACTCATGGTCTTTGACTTCTACCAACATGGAAGTGTCTCTGCAATGTTGCATGGTGCGAGAGAGAAAGGGCAGTCCCCTCTAGACTGGGAAACTCGACTCCGAATCGCCATTGGCGCAGCCAGAGGAATCGCTCACATCCACTCAGAAAGCTGCAGCAAACTCATCCATGGCAACATCAAAGCCTCAAACGTCTTCCTCAACTCCGACGGCTACGGTTGTATCTCCGACGTCGGCGTCGCCTCTCTGATGAATCTCATGACCCCGCCGGCCACCAGAGCCGCCGGATACCGTGCTCCCGAACTCAAAGACTCGCGCAAAGCATCTGAAGCCTCCGATACCTACAGCTTCGGCGTCGTGCTTCTCGAGCTCCTCACCGGAAAATTTCCGCTGCACACGAAGGGCGGCGGCGGCGATCAGATCATCCACCTGGTACGGTGGGTGAACGCGGTGGTTCGAGAGGAGTGGACGGCGGAGGTGTTCGATGTGGAGCTTTTGAGGTATCCGAACATAGAGGAGGAGATGTTAGAGACGCTGCAAATTGCGCTATCTTGTGTCGGAAGAGTTCCGGATGATCGGCCTGCAATGGTGGATGTTGCGGCTCGTTTGGAGGGGGTTCGTGGCGGAGGAAACCTGCCGGAGCAGCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCTGCCATTGGAACGTGGAGCGGAGGATATGATCCAGATTCAGGTGAATGTAGTGGAGGGTGAAGGTGGAGCTCCGTCGAGATCGAATTGA 1959 49.77 MSFKRDLELVVFVFSAVSWFAATFYLVMSEPIKDKEALLNFLNKMEHSHSLNWKNNTSLCKEWMGVQCNNDESQVVALRLAEFGLLGSIPINTLGLLSALETLILGSNFISGPFPSDFQKLRNLNSLYLQNNKFSGPLPLDFSIWKNLKIIDLSNNAFNGSIPRSISNTTHLTILNLANNSLSGRIPDLHLPSLQELDLSNNYLTGHVPQSLQRFPSRAFSGNNLVPENAVPPARPGPSPNAQPSKKGTTTLGEAAILGIIIGGSAMGLVIAAILMVMCCSNRGVIIKSKASSKLDKPELFVKKKASETQSNSLKFFQSHGLEFDLEDLLRASSEVLGKGTSGTTYKATLEDGNAVAVKRLKEVIVSKKEFEQQMEVIGSIEHENVCALRAYYYSKDEKLMVFDFYQHGSVSAMLHGAREKGQSPLDWETRLRIAIGAARGIAHIHSESCSKLIHGNIKASNVFLNSDGYGCISDVGVASLMNLMTPPATRAAGYRAPELKDSRKASEASDTYSFGVVLLELLTGKFPLHTKGGGGDQIIHLVRWVNAVVREEWTAEVFDVELLRYPNIEEEMLETLQIALSCVGRVPDDRPAMVDVAARLEGVRGGGNLPEQPPPPPPPPPPLPLERGAEDMIQIQVNVVEGEGGAPSRSN 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 54192525 54198602 + Hsped.06g07640.1 Hepe06g0764 572139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0764 652 PANTHER OS05G0588300 PROTEIN 18 607 IPR050994 -
Hepe06g0764 652 Pfam Leucine Rich Repeat 123 143 IPR001611 GO:0005515(InterPro)
Hepe06g0764 652 Pfam Leucine Rich Repeat 100 121 IPR001611 GO:0005515(InterPro)
Hepe06g0764 652 Pfam Leucine Rich Repeat 147 168 IPR001611 GO:0005515(InterPro)
Hepe06g0764 652 Gene3D Transferase(Phosphotransferase) domain 1 406 605 - -
Hepe06g0764 652 FunFam Probable inactive receptor kinase RLK902 31 190 - -
Hepe06g0764 652 Gene3D Ribonuclease Inhibitor 144 241 IPR032675 -
Hepe06g0764 652 Pfam Protein tyrosine and serine/threonine kinase 334 600 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0764 652 Gene3D Phosphorylase Kinase; domain 1 298 405 - -
Hepe06g0764 652 FunFam pollen receptor-like kinase 1 301 405 - -
Hepe06g0764 652 Pfam Leucine Rich repeats (2 copies) 170 205 IPR025875 -
Hepe06g0764 652 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Hepe06g0764 652 ProSiteProfiles Protein kinase domain profile. 331 604 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0764 652 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 406 609 - -
Hepe06g0764 652 PRINTS Leucine-rich repeat signature 191 204 - -
Hepe06g0764 652 PRINTS Leucine-rich repeat signature 148 161 - -
Hepe06g0764 652 Gene3D Ribonuclease Inhibitor 33 143 IPR032675 -
Hepe06g0764 652 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524(InterPro)
Hepe06g0764 652 MobiDBLite consensus disorder prediction 226 248 - -
Hepe06g0764 652 MobiDBLite consensus disorder prediction 604 631 - -
Hepe06g0764 652 SUPERFAMILY L domain-like 37 215 - -
Hepe06g0764 652 MobiDBLite consensus disorder prediction 610 627 - -
Hepe06g0764 652 SUPERFAMILY Protein kinase-like (PK-like) 335 625 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0764 Hepe-Chr6:54192525 Hepe08g2570 Hepe-Chr8:67362052 5.26e-130 dispersed
Hepe06g0764 Hepe-Chr6:54192525 Hepe06g1498 Hepe-Chr6:65559262 1.52e-177 wgd
Hepe06g0764 Hepe-Chr6:54192525 Hepe07g0100 Hepe-Chr7:950420 5.85e-197 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72864 PF00069 Pkinase 4.40E-32 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0764 - - - 0.0