Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0780 ATGGAGTGCAACAAAGATGAGGCAGTTAGAGCAAAAGAAATTGCTGAGAGAAAATTTACAGAGAGAAATTATTCTGCTGCAAAGAAGTTTGTTTTGAAGGCTCAAAATTTGTACCCTGGGCTTGATGGTCTCTCTCAAATGATGACAACTCTCGAAGTGTATATCTCTGCAGAGAATAAGATGAATGGGGAAATGGATTGGTATGGAATACTTGGTGTGAACCACTTGGCTGATGATGAGACTATTAGGAGACAATATAGAAAGCTGGCTCTTGTCCTCCATCCTGATAAAAACAAGTCACTTGGTGCAGAGGGTGCATTTAAATTGGTTTCAGAGGCCTGGAGTTTGTTATCTGACAAGGCAAAGAGATCGGCTTATAATCAGAAGAGGGATTTGAAAGGGGGTCGACAGAAAACTTCTACCCATACTCGTAGTACTTCGGTGCCGCCAAGTGCAAATGGCTTTCAAAATTTTAATAATGTTGCTTCAAATGCAAGGAACGTTCAAAGTAAGGTCCAGGTAGGGGCCACCTCATTTCAGCCTTCTCATAGAAAACCAGATACTTTTTGGACTCTTTGCAATCGATGCAAGACACATTACGAGTACCTTAGAGTCTATCTAAATCACACTCTCCTTTGCCCTAATTGTCATGAAGCTTTTTTGGCTGTAGAGAAGGCTCCACCCCCAAATGTATTCAAGACACCTAGTTGGTCTTCTCAGCAGCAGCATCAAAATTCTAGACAGCATCCTGTAAGTGGCAATGTGTATGGTACTGGAAGAAACGCTAAAAATCCTGATACTGGGCATTCTGTGGGTGTAAACTCAGTTGATAATACAAACTTTCAGTGGGGACCTTCCTCCAGGACAGCTGGTGGTGGTAGCACTTTTTCATCAGCTTCCGCTCAAGCTGCAAATTTGGTTCAACAAGCAAGTGAGAAGGTGAAGAGAGATCGCGATGAAACACAGCCATCAACTGAAGTGGAGAGGAGTCACTTGCCTTCTTCAAAAAAGAAAAAAACTGATGGAATTAACAGCTATGGGGTCCACGTGGCAAATCAAATGGCCAGAGGAGATGGATCAGCTGGTGTTACACCTGAATTAAGGAAGAGCTATCCTTATCCTGATGCTCAAAAGTTTTATGGTCTTTATGGTGCATTTAACAGATCCAATAGCCAGAGAGAGTTGTCACACTTTGAAGTTCGAAACATGCTCATGGACAAGGCTCGAGCTGAAATTCGTAAGAAACTTAAAGAATGGAGCTTATTGGCTGAAAAATCAACTTCGAATAAACAGTCTAAGAAGCAAAAAAATGCGGTGAATGATGGAACTAATGATATAAAAGTTAATGGTAAATCTTCTGCAAATAGTAAAGGATGGCATGCGTCAGGCTCTTTAGCTGGTAAAAGTACAGGCAGTGAAAACGATCCTATCTCCATTAATGTTCCAGATCCCGATTTTCATAATTTTGACTTGGACCGAGCCGAAAGTTCATTCGGGGATGATCAAGTCTGGGCTTGTTATGATGATGATGATGGAATGCCTCGTTTCTATGCTCGAATTCAGAAGGTGATTTCCTTAAGACCATTCAGAATGCGTATCAGTTGGCTCAACTCAAGAAGCAACACTGAGATTGGCCCTATGGACTGGATAGGTTCAGGGTTCACAAAAACCTGTGGGGATTTCAGAATTGGAAGACATGAAGTCTCAAGATCCTTAAACTCCTTCTCACATAAGGTTTCCTGGGTGAAAGGTTTACGAGGGGTGATTCGGATATTTCCTCAGAAGGGTGAAGTCTGGGCTCTTTACAGAAACTGGTCTGCGGATTGGAATAAAAATACTTCAGAAGAAACGATACACAAGTATGATATGGTAGAAGTGCTTGATGATTTTAATGAAGAACAAGGCGTGTCTGTTGCTCCTCTTGTTAAGGTTGTTGGTTTCACGACAGTGTTCCGTAGACACACAGATCCAAAAGAAGTGAGGAAGATCCTTAAAGAAGAGATGTTTTGCTTCTCCCATCAGGTCCCCAATTACTTACTTACAGGAGAAGAAGCTCAGAATGCTCCAAAGGATTGTCGGGAATTGGATCCAGCAGCAACACCTTTGGAGCTCCTCCAGGTTGATACAGAATCGAAGCAGGCAACAACAGAGGAGACTCAGGTAAAAACTGAAGAAGAGATATCTCATATTAACCAGGAAACTGTAGTTAATGAGGTGGAAGACACTTTGGAAGCTAGGAAGGTAGATGTAGTAACCCAGGAAGATGAACAAACTAAGATGGTCTGGTGA 2289 41.98 MECNKDEAVRAKEIAERKFTERNYSAAKKFVLKAQNLYPGLDGLSQMMTTLEVYISAENKMNGEMDWYGILGVNHLADDETIRRQYRKLALVLHPDKNKSLGAEGAFKLVSEAWSLLSDKAKRSAYNQKRDLKGGRQKTSTHTRSTSVPPSANGFQNFNNVASNARNVQSKVQVGATSFQPSHRKPDTFWTLCNRCKTHYEYLRVYLNHTLLCPNCHEAFLAVEKAPPPNVFKTPSWSSQQQHQNSRQHPVSGNVYGTGRNAKNPDTGHSVGVNSVDNTNFQWGPSSRTAGGGSTFSSASAQAANLVQQASEKVKRDRDETQPSTEVERSHLPSSKKKKTDGINSYGVHVANQMARGDGSAGVTPELRKSYPYPDAQKFYGLYGAFNRSNSQRELSHFEVRNMLMDKARAEIRKKLKEWSLLAEKSTSNKQSKKQKNAVNDGTNDIKVNGKSSANSKGWHASGSLAGKSTGSENDPISINVPDPDFHNFDLDRAESSFGDDQVWACYDDDDGMPRFYARIQKVISLRPFRMRISWLNSRSNTEIGPMDWIGSGFTKTCGDFRIGRHEVSRSLNSFSHKVSWVKGLRGVIRIFPQKGEVWALYRNWSADWNKNTSEETIHKYDMVEVLDDFNEEQGVSVAPLVKVVGFTTVFRRHTDPKEVRKILKEEMFCFSHQVPNYLLTGEEAQNAPKDCRELDPAATPLELLQVDTESKQATTEETQVKTEEEISHINQETVVNEVEDTLEARKVDVVTQEDEQTKMVW 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 54430932 54435676 - Hsped.06g07800.1 Hepe06g0780 572155

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0780 762 MobiDBLite consensus disorder prediction 424 474 - -
Hepe06g0780 762 MobiDBLite consensus disorder prediction 232 342 - -
Hepe06g0780 762 Gene3D DnaJ domain 63 177 IPR036869 -
Hepe06g0780 762 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Hepe06g0780 762 MobiDBLite consensus disorder prediction 125 154 - -
Hepe06g0780 762 PANTHER BNAC03G44070D PROTEIN 1 700 - -
Hepe06g0780 762 MobiDBLite consensus disorder prediction 232 309 - -
Hepe06g0780 762 MobiDBLite consensus disorder prediction 139 154 - -
Hepe06g0780 762 Pfam DnaJ domain 66 127 IPR001623 -
Hepe06g0780 762 CDD DnaJ 66 119 IPR001623 -
Hepe06g0780 762 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Hepe06g0780 762 MobiDBLite consensus disorder prediction 311 338 - -
Hepe06g0780 762 SUPERFAMILY Chaperone J-domain 57 126 IPR036869 -
Hepe06g0780 762 PRINTS DnaJ domain signature 102 122 IPR001623 -
Hepe06g0780 762 PRINTS DnaJ domain signature 86 101 IPR001623 -
Hepe06g0780 762 PRINTS DnaJ domain signature 68 86 IPR001623 -
Hepe06g0780 762 SMART dnaj_3 65 122 IPR001623 -
Hepe06g0780 762 Pfam Domain of unknown function (DUF3444) 478 684 IPR024593 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0780 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0304 Hepe-Chr2:2907208 Hepe06g0780 Hepe-Chr6:54430932 4.26e-151 dispersed
Hepe05g1136 Hepe-Chr5:56027159 Hepe06g0780 Hepe-Chr6:54430932 2.85e-208 dispersed
Hepe06g0780 Hepe-Chr6:54430932 Hepe09g0044 Hepe-Chr9:360525 4.56e-204 dispersed
Hepe06g0780 Hepe-Chr6:54430932 Hepe01g2049 Hepe-Chr1:85150465 4.34e-10 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g875 . . . . . . . . . . . . Car02g00917 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bhi12g00624 . . Lac11g0143 Hepe06g0780 . Lcy12g0122 . . . . . . . . . . Cme09g01971
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003895 2 1 3 3 3 1 2 1 2 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 1 45