Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0783 ATGACTTATCTGCAGGAGAAAATTGTGAGGTTTCAGGACTGGAGTTCAGATAAAACTTCAAGGGGGTTATATTCTGCAGATAACACTTTAAATACCGGAAAGAATGGGACAAGAGCTGACTTAGTTTCAGAAAAGCCTCTTAAAGAATTGGAAACTGGTTCTTACAGGATTAATAGAATTAAGAAATCCTTGAGATCATCTTCTTTCAATAAATTTATGTCCAGAGGTTTTGGAACCGGAAAAAATGTACTTGACCCACAGGGGCCCTTTCTCCAGAAGTGGAATAAGATATTTGTGTTGTCTTGTGTGATTGCAGTCTCGTTGGATCCTCTGTTCTTTTATGTCCCTGTGATTGATGATAAGCAGAAATGTCTTGGGTTGGACAAGAAGATGGAAATTACGGCTAGTGTGTTACGTTCATTCACAGACATTTTTTATATATTGCATATTGTTTTTCAATTTCGTACGGGATTTATCGCTCCTTCTTCTCGAGTATTTGGAAGAGGTGTTCTAGTTGAAGATGCTTGGGCAATAGCAAAGAGATATCTGTCATCGTACTTTTTGATCGACATTCTTGCAGTCCTCCCACTTCCGCAAGTAGTGATTCTGATAATTATTCCAAACCTGAAAGGCTCAAGGTCGTTGAATACCAAGAACTTGCTGAAATTTGTTGTTTTCTTCCAATATGTGCCACGGTTTATTAGAATCTACCCTTTATATAAAGAAGTTACGCGAACATCTGTACTCACTGAAACTGCATGGGCCGGAGCTGCATTTAATCTCTTTCTCTACATGCTGGCAAGTCATGTCTTTGGAGCATTCTGGTACTTGTTTTCTATAGAACGGGAAACTACATGCTGGCAGAGGTCGTGTCGTAATCATACTGGCTGTGTTTCTAATTCACTTTATTGTGATGGCAGTCCAGGAGACAACTCATTTTTAAATATTTCATGTCCTATAGTTGGAGACAATCCACCTTTTGATTTTGGAATATTTCTTGATGCTCTTAATACTGGTGTTGTGGAGTCCATGGATTTTCCACAGAAGTTCTTTTACTGTTTCTGGTGGGGTCTGAGAAATCTAAGTTCCCTGGGTCAAAATCTCAAAACAAGCACATACGTATGGGAAATTTGCTTTGCTGTTTTCATCTCCATCTCTGGCTTAGTTCTGTTTTCATTTCTCATCGGGAACATGCAGACATATTTGCAATCCACAACTACAAGATTGGAAGAAATGAGGGTTAGAAGAAGAGATGCAGAACAATGGATGTCCCACCGATTACTCCCTGAGAACCTCCGAGAACGAATCAGGAGGTATGAACAGTACAAGTGGCAGGAAACCAGAGGTGTTGATGAAGAGAATCTGGTTCGAAATCTCCCAAAAGATCTCAGAAGGGACATAAAACGCCATCTCTGCTTGTCTCTGCTAATGAGGGTACCGATATTTGAAAACATGGACGAACAATTGTTGGATGCGATGTGTGACCGTCTCAAGCCAGTACTATACACAGAGGAAAGTTACATCGTTAGAGAAGGAGACCCAGTAGACGAAATGATCTTCATTATGCGAGGCAAGTTATTGTCTGTAACTACGAATGGTGGAAGAACAGGTTTCTTTAATTCTGAACACCTCAAGGCGGGTGATTTCTGTGGAGAAGAGTTACTGACATGGGCTCTGGATCCACATTCCTCATCCAATCTACCAATTTCGACGAGAACCGTTCGAACACTTTCGGAAGTTGAAGCATTTGCTTTGAAGGCAGATGACTTGAAGCTTGTAGCCTCACAGTTCCGACGGCTTCACAGCAAGCAGCTAAGGCACACTTTCAGGTTCTATTCGCAGCAATGGAGGACATGGGCAGCATGTTTTATTCAAGCAGCGTGGCGTCGATACAACAGAAAGAAGCACGAACAGGCTCTTTTGGAAGAAGAAAACAGGTTGAAAGATGCATTGGCCAAGACAGGTGGGAGTTCTCCTAGTTTAGGTGCCACCATCTATGCATCCAGATTTGCAGCGAACATCCTTCGAACGATTCGACGCACAAGCTCACGGAAGGCCAGGATTCCAGAGAGAATACCACCGTTGTTGCTTCAGAAACCAGCAGAGCCTGATTTCACCTCTGAAGAGAATAGTTGA 2136 41.95 MTYLQEKIVRFQDWSSDKTSRGLYSADNTLNTGKNGTRADLVSEKPLKELETGSYRINRIKKSLRSSSFNKFMSRGFGTGKNVLDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYVPVIDDKQKCLGLDKKMEITASVLRSFTDIFYILHIVFQFRTGFIAPSSRVFGRGVLVEDAWAIAKRYLSSYFLIDILAVLPLPQVVILIIIPNLKGSRSLNTKNLLKFVVFFQYVPRFIRIYPLYKEVTRTSVLTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETTCWQRSCRNHTGCVSNSLYCDGSPGDNSFLNISCPIVGDNPPFDFGIFLDALNTGVVESMDFPQKFFYCFWWGLRNLSSLGQNLKTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPENLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRVPIFENMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMIFIMRGKLLSVTTNGGRTGFFNSEHLKAGDFCGEELLTWALDPHSSSNLPISTRTVRTLSEVEAFALKADDLKLVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYNRKKHEQALLEEENRLKDALAKTGGSSPSLGATIYASRFAANILRTIRRTSSRKARIPERIPPLLLQKPAEPDFTSEENS 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 54472140 54480115 + Hsped.06g07830.1 Hepe06g0783 572158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0783 711 Coils Coil 633 653 - -
Hepe06g0783 711 FunFam Cyclic nucleotide-gated ion channel 1 479 597 - -
Hepe06g0783 711 SMART cnmp_10 481 612 IPR000595 -
Hepe06g0783 711 ProSiteProfiles cAMP/cGMP binding motif profile. 481 565 IPR000595 -
Hepe06g0783 711 FunFam Cyclic nucleotide-gated ion channel 1 408 472 - -
Hepe06g0783 711 CDD CAP_ED 481 612 IPR000595 -
Hepe06g0783 711 SUPERFAMILY cAMP-binding domain-like 410 603 IPR018490 -
Hepe06g0783 711 Gene3D - 96 405 - -
Hepe06g0783 711 Gene3D Helix hairpin bin 407 472 - -
Hepe06g0783 711 MobiDBLite consensus disorder prediction 692 711 - -
Hepe06g0783 711 Pfam Ion transport protein 96 408 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe06g0783 711 Gene3D Jelly Rolls 479 599 IPR014710 -
Hepe06g0783 711 SUPERFAMILY Voltage-gated potassium channels 85 403 - -
Hepe06g0783 711 Pfam Cyclic nucleotide-binding domain 502 591 IPR000595 -
Hepe06g0783 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 20 684 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g2018 Hepe-Chr5:70747854 Hepe06g0783 Hepe-Chr6:54472140 3.02e-232 dispersed
Hepe06g0783 Hepe-Chr6:54472140 Hepe07g0083 Hepe-Chr7:779978 6.79e-254 dispersed
Hepe02g1912 Hepe-Chr2:31819252 Hepe06g0783 Hepe-Chr6:54472140 1.65e-265 transposed
Hepe02g3195 Hepe-Chr2:81492091 Hepe06g0783 Hepe-Chr6:54472140 3.03e-112 transposed
Hepe07g2555 Hepe-Chr7:69967263 Hepe06g0783 Hepe-Chr6:54472140 1.10e-130 transposed
Hepe08g2208 Hepe-Chr8:61746422 Hepe06g0783 Hepe-Chr6:54472140 1.59e-262 transposed
Hepe02g1860 Hepe-Chr2:28925007 Hepe06g0783 Hepe-Chr6:54472140 9.16e-211 wgd
Hepe05g2017 Hepe-Chr5:70741706 Hepe06g0783 Hepe-Chr6:54472140 1.62e-216 wgd
Hepe06g0783 Hepe-Chr6:54472140 Hepe07g0079 Hepe-Chr7:758841 7.53e-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0783 K05391 - csv:101221781 1339.71