Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0790 ATGAACAACTACAATAAGCTCCACTCCTCTCGCCCCGGCGTCAACACTCCGACTCCCATCGATCTTTCCCGCGATAATCCCGTACCGCCACCTCTCCCTTCCTCACGCCGCCGTACCCGAATCCTCTTCATCTCCCTCCTCTCCATCCTCCTCATCACCGCCTCCGCCGTCTCCGCGGCGGTCCTAATCCACTCCCATAGCACCGCATCCTCCCAACCCCATTTCCCCCACAACAAACCTAGCCAAGCCATCTCCCACGCCTGCAGCCGCACTCTCTACCCGTCTCTCTGCCTCTCCTCCCTCCTCTCCTTCCCCGGCTCGCTCTCCGCCGACGTCCACGACCTCGTCAACATCTCTCTCAACCTCACTCTCCACCATCTCTCCAAAGCTCTCTACTCCACTTCTCAAATCCCCATCTACCAAATCTCCAACAATCCTCTCGCCCACTCCGCTTATCAAGATTGTCAAGAACTCCTAAACGACGCCGTTGACGCCTTCTCCCTCTCCCTCTTCTCCGACGCCGCGTCCAACCACGACGTCATGACGTGGCTGAGTGCAGCGTTGACTTACCACGACACGTGTACGGATGGATTTGCGGAAGTGACTGACCCGGTCAAAGATGAGATGACGGGGAAGTTGAGTGATTTGTCGAAGATGATTAGTAATTCTTTGGCGATTTTTTCTGGGTTTGGTGGTGAGTTGCCGGTGCAGAACCGGCGGCGGCGGAGGTTGATGGCGGCGGAGAATAATGGGGTGGAGGGGGAGTTTCCTGGGTGGGTTAGTGGGAAGGATCGGCGGCTTTTGGCCACTCCCATATCGGCGATTCAGGCGGATATTGTGGTTGCTAAGGATGGGAGTGGGAAGTTTAAGACGGTGGCGGAGGCTATTGAGGCGGCGCCGTCGTCGAGTGGAAGACGAATTGTCATCTACATTAAGGCTGGAAAGTACGAAGAGGAGAATTTGAAGGTGGGAAGGAAGAAAACAAACTTGATGTTTGTAGGAGATGGGAAGGGTATAACCGTCATTTCAGGTGGCAAAAGCGTTTTTGACAAAGTTACCACTTTTCGCACCGCCACCTTTGCGGGTTCCGGGACGGGAATAATTCTACGAGACATGACATTCGAGAACACAGCAGGACCAAGCAAGCACCAAGCAGTAGCACTCCGAATAAGTGCGGACCACGCTGTAGTATACCACTGCAACATTATCGGCTATCAAGATACGCTCTACGTCCACTCGAACCGCCAATTCTTTCGCGAGTGCGACATCTACGGTACGGTTGACTTCATCTTCGGCAACGCCGCCGTGGTGTTCCAAAGCTGCAATATCTACGCCCGAAAGCCAATGGCCCAACAACAGAACACGATCACAGCACAAAATCGAAAGGATCCAAATCAGAACACCGGAATCTCGATCCACGCCTGCAAGATCCTGGCCACCGCCGACCTCGAAGCCGCCAAAGGGTCAATTCCGACTTTTCTCGGACGACCTTGGAAATTATACTCTAGGGTCGTTTACATGGTATCTTCAATGGGGGACCACATTCATCCACGTGGCTGGCTCGAGTGGCAAGGATCTTTCGCTCTTAATTCTCTTTATTACGGCGAGTATATGAATTCCGGGCCGGGTGCCGCCGTCGGGTCGCGGGTTAAGTGGCCGGGTTATCGGGTTATTACCTCCACGGTTGAAGCTTCTAAATTTACTGTCGGTGAATTTATTTACGGCTCCTCTTGGTTACCTTCTACTGGGGTGTCATTTTCCTCCGGATTATCCGCTAATTAA 1782 53.42 MNNYNKLHSSRPGVNTPTPIDLSRDNPVPPPLPSSRRRTRILFISLLSILLITASAVSAAVLIHSHSTASSQPHFPHNKPSQAISHACSRTLYPSLCLSSLLSFPGSLSADVHDLVNISLNLTLHHLSKALYSTSQIPIYQISNNPLAHSAYQDCQELLNDAVDAFSLSLFSDAASNHDVMTWLSAALTYHDTCTDGFAEVTDPVKDEMTGKLSDLSKMISNSLAIFSGFGGELPVQNRRRRRLMAAENNGVEGEFPGWVSGKDRRLLATPISAIQADIVVAKDGSGKFKTVAEAIEAAPSSSGRRIVIYIKAGKYEEENLKVGRKKTNLMFVGDGKGITVISGGKSVFDKVTTFRTATFAGSGTGIILRDMTFENTAGPSKHQAVALRISADHAVVYHCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQSCNIYARKPMAQQQNTITAQNRKDPNQNTGISIHACKILATADLEAAKGSIPTFLGRPWKLYSRVVYMVSSMGDHIHPRGWLEWQGSFALNSLYYGEYMNSGPGAAVGSRVKWPGYRVITSTVEASKFTVGEFIYGSSWLPSTGVSFSSGLSAN 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 54636648 54642766 + Hsped.06g07900.1 Hepe06g0790 572165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0790 593 Pfam Plant invertase/pectin methylesterase inhibitor 83 226 IPR006501 GO:0004857(InterPro)
Hepe06g0790 593 MobiDBLite consensus disorder prediction 1 33 - -
Hepe06g0790 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 81 230 IPR035513 -
Hepe06g0790 593 NCBIfam pectinesterase inhibitor domain 60 228 IPR006501 GO:0004857(InterPro)
Hepe06g0790 593 SMART PMEI_2 79 226 IPR006501 GO:0004857(InterPro)
Hepe06g0790 593 FunFam Pectinesterase 272 590 - -
Hepe06g0790 593 CDD PMEI-like_3 87 232 - -
Hepe06g0790 593 Pfam Pectinesterase 278 575 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Hepe06g0790 593 PANTHER PECTINESTERASE 42 581 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Hepe06g0790 593 MobiDBLite consensus disorder prediction 1 22 - -
Hepe06g0790 593 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Hepe06g0790 593 Gene3D - 272 590 IPR012334 -
Hepe06g0790 593 SUPERFAMILY Pectin lyase-like 273 589 IPR011050 -
Hepe06g0790 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 82 228 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1875 Hepe-Chr3:75777093 Hepe06g0790 Hepe-Chr6:54636648 5.88e-148 dispersed
Hepe04g1782 Hepe-Chr4:72746132 Hepe06g0790 Hepe-Chr6:54636648 4.48e-141 dispersed
Hepe06g0790 Hepe-Chr6:54636648 Hepe06g1367 Hepe-Chr6:63939918 2.06e-145 dispersed
Hepe06g0790 Hepe-Chr6:54636648 Hepe07g0066 Hepe-Chr7:602499 2.83e-251 wgd
Hepe06g0790 Hepe-Chr6:54636648 HepeContig66g0115 Hepe-ChrContig66:7762778 8.01e-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0790 - - - 0.0