Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0817 ATGGCTTCGGATCCGAAGATTCATCTATTTGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGTTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACACCGTTCATGGAGGATCATCCTGGAGGTGATGAAGTACTGTTGTCTGCAACTGGAAAAGATGCCACAAACGATTTCGAAGATGTCGGGCACAGCGATTCAGCAAGAGAAATGATGGAGAAATATTACATTGGAGAAATTGATCCTTCAGCAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACTAACCAAGATAAGACACCTGAGTTTGTGATTAAGATCTTGCAGTTTCTGGTTCCCATATTGATTTTGGGTTTGGCATTTGCTGTTCGACACTACACCAAGAATGAATGA 399 40.35 MASDPKIHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMEKYYIGEIDPSAVPLKKIYIPSQQTNQDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE 132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 54970997 54973659 + Hsped.06g08170.1 Hepe06g0817 572192

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0817 132 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Hepe06g0817 132 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Hepe06g0817 132 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Hepe06g0817 132 FunFam Cytochrome b5 type B 2 85 - -
Hepe06g0817 132 PANTHER CYTOCHROME B5 5 130 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Hepe06g0817 132 SMART Cyt_b5_2 8 81 IPR001199 -
Hepe06g0817 132 Gene3D - 1 85 IPR036400 -
Hepe06g0817 132 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0817 K23490 - - csv:101207109 258.455
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0349 Hepe-Chr3:5042167 Hepe06g0817 Hepe-Chr6:54970997 3.06e-58 dispersed
Hepe05g1755 Hepe-Chr5:67866386 Hepe06g0817 Hepe-Chr6:54970997 2.29e-64 dispersed
Hepe06g0817 Hepe-Chr6:54970997 Hepe06g1849 Hepe-Chr6:69606242 2.57e-56 dispersed
Hepe03g0605 Hepe-Chr3:12099595 Hepe06g0817 Hepe-Chr6:54970997 7.31e-11 transposed
Hepe03g0793 Hepe-Chr3:25364047 Hepe06g0817 Hepe-Chr6:54970997 5.49e-41 transposed
Hepe05g2053 Hepe-Chr5:71018579 Hepe06g0817 Hepe-Chr6:54970997 7.73e-50 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g991 . . . Bda07g01952 . . . Bma14g02023 . . Cma02g01139 Cma15g01010 Car02g00943 Car15g00942 . Cpe05g00584 . . . . . . . . Cla01g00023 Cam01g0022 Cec01g0020 Cco01g0024 Clacu01g0023 Cmu01g0022 Cre09g2485 Cone1ag1008 Cone5ag0716 . . . Csa05g00025 Chy09g01458 . . Blo09g00007 . . . . . . . Cmo02g01170 Cmo15g01073 . . . . . Cpe13g00327 Bhi12g00682 . . . Hepe06g0817 . . . . . . . . . Lsi09g00003 . . Cme09g02007
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G53560 77.6 4.1e-57 217.6
Hepe05g1755 . 1 133 NADPH P450 reductases AT5G53560 69.2 4.0e-52 201.1
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G53560 69.5 2.4e-49 191.8
Hepe06g1849 . 4 131 NADPH P450 reductases AT5G53560 64.8 1.9e-46 182.2
Hepe05g1755 . 1 132 NADPH P450 reductases AT5G48810 64.9 8.1e-48 186.8
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G48810 63.8 9.9e-46 179.9
Hepe06g1849 . 2 132 NADPH P450 reductases AT5G48810 62.4 2.2e-45 178.7
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G48810 58.1 2.4e-44 175.3
Hepe05g1755 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.7e-50 195.7
Hepe03g0349 . 22 128 NADPH P450 reductases AT2G32720 79.4 2.1e-45 178.7
Hepe06g1849 . 21 132 NADPH P450 reductases AT2G32720 71.4 1.1e-41 166.4
Hepe06g0817 . 22 131 NADPH P450 reductases AT2G32720 67.0 1.5e-38 156.0
Hepe10g0572 . 1 131 NADPH P450 reductases AT1G26340 57.0 1.1e-38 156.4
Hepe04g0560 . 2 281 NADPH P450 reductases AT5G17770 81.8 6.8e-131 463.8
Hepe05g0611 . 8 286 NADPH P450 reductases AT5G17770 77.8 2.3e-126 448.7
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G53560 77.6 4.1e-57 217.6
Hepe05g1755 . 1 133 NADPH P450 reductases AT5G53560 69.2 4.0e-52 201.1
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G53560 69.5 2.4e-49 191.8
Hepe06g1849 . 4 131 NADPH P450 reductases AT5G53560 64.8 1.9e-46 182.2
Hepe05g1755 . 1 132 NADPH P450 reductases AT5G48810 64.9 8.1e-48 186.8
Hepe03g0349 . 1 128 NADPH P450 reductases AT5G48810 63.8 9.9e-46 179.9
Hepe06g1849 . 2 132 NADPH P450 reductases AT5G48810 62.4 2.2e-45 178.7
Hepe06g0817 . 1 132 NADPH P450 reductases AT5G48810 58.1 2.4e-44 175.3
Hepe05g1755 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.7e-50 195.7
Hepe03g0349 . 22 128 NADPH P450 reductases AT2G32720 79.4 2.1e-45 178.7
Hepe06g1849 . 21 132 NADPH P450 reductases AT2G32720 71.4 1.1e-41 166.4
Hepe06g0817 . 22 131 NADPH P450 reductases AT2G32720 67.0 1.5e-38 156.0
Hepe10g0572 . 1 131 NADPH P450 reductases AT1G26340 57.0 1.1e-38 156.4
Hepe04g0560 . 2 281 NADPH P450 reductases AT5G17770 81.8 6.8e-131 463.8
Hepe05g0611 . 8 286 NADPH P450 reductases AT5G17770 77.8 2.3e-126 448.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156