Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0817 ATGGCTTCGGATCCGAAGATTCATCTATTTGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGTTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACACCGTTCATGGAGGATCATCCTGGAGGTGATGAAGTACTGTTGTCTGCAACTGGAAAAGATGCCACAAACGATTTCGAAGATGTCGGGCACAGCGATTCAGCAAGAGAAATGATGGAGAAATATTACATTGGAGAAATTGATCCTTCAGCAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACTAACCAAGATAAGACACCTGAGTTTGTGATTAAGATCTTGCAGTTTCTGGTTCCCATATTGATTTTGGGTTTGGCATTTGCTGTTCGACACTACACCAAGAATGAATGA 399 40.35 MASDPKIHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMEKYYIGEIDPSAVPLKKIYIPSQQTNQDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE 132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 54970997 54973659 + Hsped.06g08170.1 Hepe06g0817 572192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0817 132 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Hepe06g0817 132 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Hepe06g0817 132 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Hepe06g0817 132 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Hepe06g0817 132 FunFam Cytochrome b5 type B 2 85 - -
Hepe06g0817 132 PANTHER CYTOCHROME B5 5 130 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Hepe06g0817 132 SMART Cyt_b5_2 8 81 IPR001199 -
Hepe06g0817 132 Gene3D - 1 85 IPR036400 -
Hepe06g0817 132 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0349 Hepe-Chr3:5042167 Hepe06g0817 Hepe-Chr6:54970997 3.06e-58 dispersed
Hepe05g1755 Hepe-Chr5:67866386 Hepe06g0817 Hepe-Chr6:54970997 2.29e-64 dispersed
Hepe06g0817 Hepe-Chr6:54970997 Hepe06g1849 Hepe-Chr6:69606242 2.57e-56 dispersed
Hepe03g0605 Hepe-Chr3:12099595 Hepe06g0817 Hepe-Chr6:54970997 7.31e-11 transposed
Hepe03g0793 Hepe-Chr3:25364047 Hepe06g0817 Hepe-Chr6:54970997 5.49e-41 transposed
Hepe05g2053 Hepe-Chr5:71018579 Hepe06g0817 Hepe-Chr6:54970997 7.73e-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0817 K23490 - csv:101207109 258.455