Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0848 | ATGTACGTAGAAACCCCACAGAAGATCAAAGCAGCAATTTCTGTTTCTACCGCTCGTTCTTGCTTTCCCAGTTGTAGAATTATTCTCCCTTTGGAACCGGAGATGTGTGATGCGAAGGAGAAACTGAATTTTGCACAAGATGTTCCAGTTGCTGTAAGTGAAGGCAACCAAGTTGATTCAAAAGATGAGCTCCATGATTCTCTCCCTGTGCCAGCTGAAAATAAGATTGATTCACCCGAGACTCATGTACAGGAAGTTGTACCTCCTGAGGATGATAATTTAGATAAACCTACGATTCTTCAGCAATCAAATCAAGAGTCTGTGACTTCACTTCCCTTGGAACATGACAAAGAGTTGGATAAACCTGATGCAAAACCTGCTTCTGATGAGTTGCCCCCAATGGAGTTGGATCTAGATGCTGCTACTCCCAACATTCACCTGGAAACCGTTCAATCCTCGATGGATGCCAAATCTGAGGCCCTTGACATGGACATGCCTGAAACTAAAACTGGTCTTGATGATGCTTCAACAGAAAGTCATGATGAACCTGTAACTCCCCATCCAGTGTCACCTTGTATTAAAGCTGAAACAGAGATTTCCATAGAATTGAAGGTCAATGAAGAAAGTGTTACTACACCTCATAATGGGCATTCAAACATGAATCACTCGTTTGTTTTGGATGAAAATCATATTGCTGAAGGTGGTGAATCAGGAACAGAAGAAGATCAATCTGCTTTCATGAAGGAGCTTGAGAACTTCTTCAGAGAAAGAAGCCTGGAATTCAAACCTCCCAAGTTTTACGGAGAGGGTCTGAATTGCCTCAAGCTATGGAGGGCTGTGACTAGATTGGGAGGCTATGACAAGGTGACTTCATGCAAGTTGTGGCGGCAAGTGGGAGAGTCTTTCAAGCCCCCAAAGACGTGTACGACAGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCTCTTCTTGATTATGAGAGGCATAAAATCCATGGTGGCGAACTTAGTGTACCTATTGCTTCCAACGCAGAACCTATGAGTATTGAAAACCAGGGATCAGGATCAGGTAGAGCACGAAGAGATGCTGCTGCACGTGCCATGCAGGGTTGGCACTCACAGCGTCTTCTGGGAAATGGTGAAGTTAGTGACCCGATTATCAAGGATAAGAACTCACTTTCAATACAGAAAAGGGAAAAACAACTTAAAAGCATTGGTATTCTTAAACGTAAGAAACCATCTTACATGGAGCATTCCATGAAATCAGCGCGTACCAAATCATCAAAACCACAGTTGGACGTAGCAGTAGTGGATATTGGACAACCAGCTGATTGGGTCAAGGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTGGTTCCCGGACTACTTCGCGAGGAGGTGCGTGTTCAGTCTGATCCGGCAGGACGCTTGGTTATTAGTGGTGAACCCGAACATCCGGATAATCCTTGGGGTGTCACACCCTTCAAAAAGGTAGTCAGCCTTCCATCAAGGATTGATCCACACCAGACTTCCGCCGTTGTCACCTTGCATGGACAGTTGTTTGTTCGCGTTCCGTTTGAACAGTTGGAATGA | 1605 | 44.24 | MYVETPQKIKAAISVSTARSCFPSCRIILPLEPEMCDAKEKLNFAQDVPVAVSEGNQVDSKDELHDSLPVPAENKIDSPETHVQEVVPPEDDNLDKPTILQQSNQESVTSLPLEHDKELDKPDAKPASDELPPMELDLDAATPNIHLETVQSSMDAKSEALDMDMPETKTGLDDASTESHDEPVTPHPVSPCIKAETEISIELKVNEESVTTPHNGHSNMNHSFVLDENHIAEGGESGTEEDQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIHGGELSVPIASNAEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSIQKREKQLKSIGILKRKKPSYMEHSMKSARTKSSKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQLE | 534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 55404567 | 55411268 | + | Hsped.06g08480.1 | Hepe06g0848 | 572223 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0848 | 534 | Gene3D | - | 240 | 337 | IPR036431 | GO:0003677(InterPro) | |
Hepe06g0848 | 534 | MobiDBLite | consensus disorder prediction | 55 | 135 | - | - | |
Hepe06g0848 | 534 | Pfam | ARID/BRIGHT DNA binding domain | 243 | 327 | IPR001606 | GO:0003677(InterPro) | |
Hepe06g0848 | 534 | MobiDBLite | consensus disorder prediction | 166 | 181 | - | - | |
Hepe06g0848 | 534 | Gene3D | - | 416 | 534 | IPR008978 | - | |
Hepe06g0848 | 534 | CDD | ARID | 242 | 327 | - | - | |
Hepe06g0848 | 534 | SUPERFAMILY | HSP20-like chaperones | 445 | 530 | IPR008978 | - | |
Hepe06g0848 | 534 | MobiDBLite | consensus disorder prediction | 166 | 190 | - | - | |
Hepe06g0848 | 534 | FunFam | AT-rich interactive domain-containing protein 3 | 426 | 534 | - | - | |
Hepe06g0848 | 534 | SMART | ARID_2 | 237 | 327 | - | - | |
Hepe06g0848 | 534 | MobiDBLite | consensus disorder prediction | 78 | 92 | - | - | |
Hepe06g0848 | 534 | SUPERFAMILY | ARID-like | 235 | 339 | IPR036431 | GO:0003677(InterPro) | |
Hepe06g0848 | 534 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT | 97 | 532 | IPR045147 | GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0006357(InterPro)|GO:0006357(PANTHER) | |
Hepe06g0848 | 534 | ProSiteProfiles | ARID domain profile. | 240 | 331 | IPR001606 | GO:0003677(InterPro) | |
Hepe06g0848 | 534 | Pfam | Hsp20/alpha crystallin family | 451 | 531 | IPR002068 | - | |
Hepe06g0848 | 534 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 434 | 534 | IPR002068 | - | |
Hepe06g0848 | 534 | SMART | bright_3 | 241 | 332 | IPR001606 | GO:0003677(InterPro) | |
Hepe06g0848 | 534 | CDD | ACD_sHsps_p23-like | 453 | 529 | - | - | |
Hepe06g0848 | 534 | FunFam | AT-rich interactive domain-containing protein 3 | 240 | 339 | - | - | |
Hepe06g0848 | 534 | MobiDBLite | consensus disorder prediction | 96 | 110 | - | - | |
Hepe06g0848 | 534 | MobiDBLite | consensus disorder prediction | 111 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2371 | Hepe-Chr1:88140496 | Hepe06g0848 | Hepe-Chr6:55404567 | 1.64e-148 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55752 | PF00011 | HSP20 | 9.00E-06 | CL0190 | Hepe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0848 | - | - | - | 0.0 |