Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0849 ATGGCGTCGCAGGATTCCGATTTGGATTCTTCAACTTCCAATCCGATTCCCACTGATGCTACTCCCTCTCCGTTGAAAGATCCCCCTTCCACCTCCTCCACCATCTCTGAATCTGAAGAAAATCCCTGCACATCATCATCTTCACCTTCACCTTCACCTTCAATTCACTTACCTCTCTCTTGGCCTTCCGATGCCACTCTTTCTCTCCAATGGATTCACCATCTCATCGCTGCATTCGACTGGTCTTCCAAGAATTTACCTCCGTCCGAGTTTCCTTCTGTTCTTCCCGTCGATGTTTTCGACAGTCTGATTCTCACTGCTTCGAAAATCCTCCATAAAGAGCCCAATTGTGTTAGAATACTTGAAGATTCAGTCGCCAGCAGCAGCGACTCGACTGTAGTCGTCGTCGGAGATGTCCATGGTCAATTTCATGATGTCCTCTTTCTCCTGCAGGATGCTGGTTTTCCTTCTGAGAATCGTTTTTATGTCTTCAATGGAGATTATGTCGACAGAGGAGCGTGGGGTCTTGAAACGTTTATGCTCTTATTGGCTTGGAAGGTGTTCATGCCACATCGAGTTTTTCTTCTTCGTGGAAACCATGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAAGTGCTAGCCAAGTATGGAGACAAAGGTAAACATGTCTATCGGAAGTGTTTGGGATGTTTCGAAGGGCTGCCTTTGGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGCGTATCGGTTCCTTCTTCTAAAAGATCAAAAGGGAAAAAGAATCGTAGAATAGTCTTAAATCCTGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCTGGTGATGTGTTGTGGTCTGATCCCTCCATGAAACCTGGTCTCTCCCCAAATAGAGAGAGAGGCATAGGTCTTTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGTTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAAAGGCCCGGTCTTGGAGGAATGGATCAGGGGTACACGATAGATCATGTTGTAGATTCTGGGAAGCTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCTACTGAGGATAGGTACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCAAATTTTGATGTTCCGAACATACATAGTTTTGAAGCCATTACTCCACGACCGAAGGTCAATCCGTATTATGACTTTGAAAATGTAATTGATTCTGACGAAGAATTAGATTTGAAAACAATGGCAACTACATGA 1386 44.01 MASQDSDLDSSTSNPIPTDATPSPLKDPPSTSSTISESEENPCTSSSSPSPSPSIHLPLSWPSDATLSLQWIHHLIAAFDWSSKNLPPSEFPSVLPVDVFDSLILTASKILHKEPNCVRILEDSVASSSDSTVVVVGDVHGQFHDVLFLLQDAGFPSENRFYVFNGDYVDRGAWGLETFMLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLAKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVSVPSSKRSKGKKNRRIVLNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMKPGLSPNRERGIGLLWGPDCTEEFLKKFDLKLIIRSHEGPDAREKRPGLGGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEDRYKNKGAYIVLEPPNFDVPNIHSFEAITPRPKVNPYYDFENVIDSDEELDLKTMATT 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 55411588 55422259 - Hsped.06g08490.1 Hepe06g0849 572224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0849 461 ProSitePatterns Serine/threonine specific protein phosphatases signature. 196 201 IPR006186 GO:0016787(InterPro)
Hepe06g0849 461 FunFam Serine/threonine-protein phosphatase 79 456 - -
Hepe06g0849 461 SUPERFAMILY Metallo-dependent phosphatases 92 438 IPR029052 -
Hepe06g0849 461 CDD MPP_PP7 61 442 IPR041754 -
Hepe06g0849 461 Gene3D - 91 458 IPR029052 -
Hepe06g0849 461 MobiDBLite consensus disorder prediction 1 55 - -
Hepe06g0849 461 Pfam Calcineurin-like phosphoesterase 132 358 IPR004843 GO:0016787(InterPro)
Hepe06g0849 461 PRINTS Serine/threonine phosphatase family signature 195 219 IPR006186 GO:0016787(InterPro)
Hepe06g0849 461 PRINTS Serine/threonine phosphatase family signature 386 402 IPR006186 GO:0016787(InterPro)
Hepe06g0849 461 PRINTS Serine/threonine phosphatase family signature 292 319 IPR006186 GO:0016787(InterPro)
Hepe06g0849 461 PRINTS Serine/threonine phosphatase family signature 162 189 IPR006186 GO:0016787(InterPro)
Hepe06g0849 461 PRINTS Serine/threonine phosphatase family signature 132 159 IPR006186 GO:0016787(InterPro)
Hepe06g0849 461 PRINTS Serine/threonine phosphatase family signature 232 258 IPR006186 GO:0016787(InterPro)
Hepe06g0849 461 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 36 455 IPR051134 -
Hepe06g0849 461 SMART pp2a_7 95 432 IPR006186 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3025 Hepe-Chr2:79401877 Hepe06g0849 Hepe-Chr6:55411588 9.02e-128 dispersed
Hepe06g0849 Hepe-Chr6:55411588 Hepe08g0054 Hepe-Chr8:434861 4.72e-39 dispersed
Hepe06g0849 Hepe-Chr6:55411588 Hepe02g0057 Hepe-Chr2:680470 2.34e-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0849 K04460 - csv:116402510 779.245