Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0855 ATGACTCGCTATATCAGAGCTCTGGCGGCCAATACTTCGTCGGCGTCGGCGTCGGCTCCCCCGCCAGAGGCGGTGGCGTTAGAGTCGGACTTCGTGGTGATTCTGGCGGCGCTACTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTAGCTCGGTGCGCGTGGCTCCGCCGTGGCGGTAGTGGGGCTGCAGCAAATCAGGCGTCTGCGAATAGGGGACTGAAGAAGAAGACCCTGCAATCCCTGCCGAAATTCACGTACAAATCAAGCGGCGGAGAGGGGAAATTTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGTGGTCATTGCTTCCATCTCAGCTGTGTAGACACATGGTTGGGGTCACACTCCTCCTGCCCCTCCTGCCGCCAGATTCTGGTGGTGGCCAGATGCCAGAAGTGTGGGCAGTTTCCGGCAGTCGTGGACGGCGGCGCTCACAACGAAGAAGACCACAAGAGAAGCGAAGATAACAATGGTAACAGCGCTGGATTGGGATTTTTGCCTTGA 567 58.73 MTRYIRALAANTSSASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGSGAAANQASANRGLKKKTLQSLPKFTYKSSGGEGKFAAECAICLAEFMEGEEIRQLPQCGHCFHLSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVDGGAHNEEDHKRSEDNNGNSAGLGFLP 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 55468659 55469225 - Hsped.06g08550.1 Hepe06g0855 572230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0855 188 SMART ring_2 101 142 IPR001841 -
Hepe06g0855 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 147 IPR013083 -
Hepe06g0855 188 SMART FANCL_C_2 97 151 - -
Hepe06g0855 188 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Hepe06g0855 188 MobiDBLite consensus disorder prediction 165 188 - -
Hepe06g0855 188 Pfam Ring finger domain 100 143 IPR001841 -
Hepe06g0855 188 SUPERFAMILY RING/U-box 80 149 - -
Hepe06g0855 188 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 18 166 IPR052788 -
Hepe06g0855 188 CDD RING-H2_EL5-like 100 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1381 Hepe-Chr1:79030684 Hepe06g0855 Hepe-Chr6:55468659 2.10e-13 dispersed
Hepe01g2358 Hepe-Chr1:88069437 Hepe06g0855 Hepe-Chr6:55468659 1.07e-59 dispersed
Hepe04g2087 Hepe-Chr4:75706711 Hepe06g0855 Hepe-Chr6:55468659 7.16e-22 dispersed
Hepe06g0855 Hepe-Chr6:55468659 Hepe08g1257 Hepe-Chr8:13467668 4.57e-25 dispersed
Hepe06g0855 Hepe-Chr6:55468659 Hepe02g3278 Hepe-Chr2:82390042 1.10e-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0855 - - - 0.0