Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0855 | ATGACTCGCTATATCAGAGCTCTGGCGGCCAATACTTCGTCGGCGTCGGCGTCGGCTCCCCCGCCAGAGGCGGTGGCGTTAGAGTCGGACTTCGTGGTGATTCTGGCGGCGCTACTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTAGCTCGGTGCGCGTGGCTCCGCCGTGGCGGTAGTGGGGCTGCAGCAAATCAGGCGTCTGCGAATAGGGGACTGAAGAAGAAGACCCTGCAATCCCTGCCGAAATTCACGTACAAATCAAGCGGCGGAGAGGGGAAATTTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGTGGTCATTGCTTCCATCTCAGCTGTGTAGACACATGGTTGGGGTCACACTCCTCCTGCCCCTCCTGCCGCCAGATTCTGGTGGTGGCCAGATGCCAGAAGTGTGGGCAGTTTCCGGCAGTCGTGGACGGCGGCGCTCACAACGAAGAAGACCACAAGAGAAGCGAAGATAACAATGGTAACAGCGCTGGATTGGGATTTTTGCCTTGA | 567 | 58.73 | MTRYIRALAANTSSASASAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGSGAAANQASANRGLKKKTLQSLPKFTYKSSGGEGKFAAECAICLAEFMEGEEIRQLPQCGHCFHLSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVDGGAHNEEDHKRSEDNNGNSAGLGFLP | 188 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 55468659 | 55469225 | - | Hsped.06g08550.1 | Hepe06g0855 | 572230 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0855 | 188 | SMART | ring_2 | 101 | 142 | IPR001841 | - | |
Hepe06g0855 | 188 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 62 | 147 | IPR013083 | - | |
Hepe06g0855 | 188 | SMART | FANCL_C_2 | 97 | 151 | - | - | |
Hepe06g0855 | 188 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 143 | IPR001841 | - | |
Hepe06g0855 | 188 | MobiDBLite | consensus disorder prediction | 165 | 188 | - | - | |
Hepe06g0855 | 188 | Pfam | Ring finger domain | 100 | 143 | IPR001841 | - | |
Hepe06g0855 | 188 | SUPERFAMILY | RING/U-box | 80 | 149 | - | - | |
Hepe06g0855 | 188 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 18 | 166 | IPR052788 | - | |
Hepe06g0855 | 188 | CDD | RING-H2_EL5-like | 100 | 143 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1381 | Hepe-Chr1:79030684 | Hepe06g0855 | Hepe-Chr6:55468659 | 2.10e-13 | dispersed | |
Hepe01g2358 | Hepe-Chr1:88069437 | Hepe06g0855 | Hepe-Chr6:55468659 | 1.07e-59 | dispersed | |
Hepe04g2087 | Hepe-Chr4:75706711 | Hepe06g0855 | Hepe-Chr6:55468659 | 7.16e-22 | dispersed | |
Hepe06g0855 | Hepe-Chr6:55468659 | Hepe08g1257 | Hepe-Chr8:13467668 | 4.57e-25 | dispersed | |
Hepe06g0855 | Hepe-Chr6:55468659 | Hepe02g3278 | Hepe-Chr2:82390042 | 1.10e-22 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0855 | - | - | - | 0.0 |