Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0891 | ATGCCGATTGAGGATGATGTTGAGAGCTGCGGTAGTCGACCCACCAACTCCTCCTCCTCCTCCTCTCATGCCAACCCGAGGCATCATCGCCAGAAGCTCGAGGTTTACAATGAAGTCCTCCGTCGAATTCAGGAATCCAATTCCTATGAGGCCAATCTCCCTGGCTTTCATCATCACCTTTGGCTCCATTTCAATCGCCTCCCTGCTCGATACGCATTGGATGTGAATGTCGATAGGGCGGAAGATGTACTCACACATAAGAGATTACTTCAATTGGCTGTAGACCCTGCTAACCGACCTGCATTTGAAGTTCGTTCTGTGCAGGTTTATCCTTCTGCTAATGATAACCTTATCAATTCTTCTTGTTTGGATTCTTCAATGATGGAAGATGCTCAGAGCTCTTATAATTGTTCTAATAGACAGGGGAACCATCCACCTCCAACCTTTGGTTCTTCACCTAATCTTGAAGCACTTGCACTTCAGGCCAGCAAGTATGTTGTTGAAGATAGGGACAGTGCGGCACCCTGCTTTTCTCGGCCAATGCATGAGATCACATTTGCAACAAGTGACAAGCCTAAGGTCCTCAGTCAGTTAACTTCCTTACTAGCTGATGTTGGACTTAACATACAAGAAGCTCATGCTTTCTCCTCTGTTGATGGTTTCTCTCTGGATGTTTTTGTCATCGATGGTTGGCCTTATGAGGAAACCGAGGAGCTGAAAAGGGCATTAGAAAAAGAAATTTTAAATTTGAAGGAGCCATGTTGGACAGAAAAGCAGTCCAGTCCTGCTTTGGGTAAGCATAACCAGAATAGAGTTGAATCTTTTCCTAGTTCTGTTGAAATACCTACTGATGGTACTGATGTCTGGGAAATTGACACCAGACAACTAAAATTTGAGAATAAAGTTGGATCTGGGTCATATGGGGACCTGTATCGGGGCACGTATTGTAGTCAGGAAGTAGCTATTAAAGTACTGAAGCCTGAGCGTATTAATGAAGAGATGCTCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTCATTGGCGCTTGTACTAAACCTCCAAACCTATGCATCGTGACAGAGTTTATGTCGAGAGGAAGCATATATGACTTCCTTCATAAGCAAAGAGGTGTATTTAATCTTCCGTCTTTACTTAAAGTAGCCATTGATATTTCAAGAGGGATGAATTATTTGCATGAAAATAATATAATCCACCGTGACCTCAAGACTGCCAATCTTCTGATGGATGAAAACATGGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTTCAATCTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAGTCATTGAGCATAAACCTTATGGTAATAAGGCAGATGTTTTCAGTTTTGGAATAGCATTATGGGAGCTTTTAACTGGAGAAATTCCTTACTCATCCATGACCCCATTACAAGCAGCGGTTGGCGTGGTCCAGAAGAAACTGCGGCCTACAATGCCCAAGAATGCCCATCCCAATCTCGCCGAACTGCTTGAAAGATGCTGGCGACAGGATCCAACCGAACGGCCAAACTTCTCTGAAATTCTAGAGATCCTCAAGCAGATTTCAGAGCAGCCTTCAAAAGGAGGCACCATTGAATGCACTGGAGGAGCTTCAGAGGTGCAATGCTGCTGCTTTGAAGGAACAATAATGATGTCATTTGGAGAAAGCTTCAACAATCAGACTCTTCACTGTATCTGTTCAGAAGCTGCCGAGCGCGAACTCGAACCTGCAATCGAACCAATGCATGCATGA | 1833 | 43.7 | MPIEDDVESCGSRPTNSSSSSSHANPRHHRQKLEVYNEVLRRIQESNSYEANLPGFHHHLWLHFNRLPARYALDVNVDRAEDVLTHKRLLQLAVDPANRPAFEVRSVQVYPSANDNLINSSCLDSSMMEDAQSSYNCSNRQGNHPPPTFGSSPNLEALALQASKYVVEDRDSAAPCFSRPMHEITFATSDKPKVLSQLTSLLADVGLNIQEAHAFSSVDGFSLDVFVIDGWPYEETEELKRALEKEILNLKEPCWTEKQSSPALGKHNQNRVESFPSSVEIPTDGTDVWEIDTRQLKFENKVGSGSYGDLYRGTYCSQEVAIKVLKPERINEEMLKEFSQEVYIMRKVRHKNVVQFIGACTKPPNLCIVTEFMSRGSIYDFLHKQRGVFNLPSLLKVAIDISRGMNYLHENNIIHRDLKTANLLMDENMVVKVADFGVARVQSQSGVMTAETGTYRWMAPEVIEHKPYGNKADVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKKLRPTMPKNAHPNLAELLERCWRQDPTERPNFSEILEILKQISEQPSKGGTIECTGGASEVQCCCFEGTIMMSFGESFNNQTLHCICSEAAERELEPAIEPMHA | 610 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 56192594 | 56201114 | - | Hsped.06g08910.1 | Hepe06g0891 | 572266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0891 | 610 | CDD | STKc_MAP3K-like | 302 | 545 | - | - | |
Hepe06g0891 | 610 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 51 | 548 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Hepe06g0891 | 610 | Pfam | Protein tyrosine and serine/threonine kinase | 296 | 545 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | Gene3D | Phosphorylase Kinase; domain 1 | 286 | 374 | - | - | |
Hepe06g0891 | 610 | Coils | Coil | 233 | 253 | - | - | |
Hepe06g0891 | 610 | ProSiteProfiles | ACT domain profile. | 183 | 258 | IPR002912 | - | |
Hepe06g0891 | 610 | PRINTS | Tyrosine kinase catalytic domain signature | 516 | 538 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | PRINTS | Tyrosine kinase catalytic domain signature | 472 | 494 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | PRINTS | Tyrosine kinase catalytic domain signature | 370 | 383 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | PRINTS | Tyrosine kinase catalytic domain signature | 407 | 425 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | PRINTS | Tyrosine kinase catalytic domain signature | 453 | 463 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Hepe06g0891 | 610 | SMART | serkin_6 | 296 | 548 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | CDD | ACT_TyrKc | 181 | 248 | - | - | |
Hepe06g0891 | 610 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 413 | 425 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | FunFam | Serine/threonine-protein kinase isoform 1 | 286 | 374 | - | - | |
Hepe06g0891 | 610 | SUPERFAMILY | ACT-like | 181 | 245 | IPR045865 | - | |
Hepe06g0891 | 610 | ProSitePatterns | Protein kinases ATP-binding region signature. | 302 | 323 | IPR017441 | GO:0005524(InterPro) | |
Hepe06g0891 | 610 | ProSiteProfiles | Protein kinase domain profile. | 296 | 548 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe06g0891 | 610 | Gene3D | Transferase(Phosphotransferase) domain 1 | 375 | 562 | - | - | |
Hepe06g0891 | 610 | SUPERFAMILY | Protein kinase-like (PK-like) | 269 | 545 | IPR011009 | - | |
Hepe06g0891 | 610 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - | |
Hepe06g0891 | 610 | MobiDBLite | consensus disorder prediction | 133 | 153 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2309 | Hepe-Chr1:87687402 | Hepe06g0891 | Hepe-Chr6:56192594 | 1.37e-221 | dispersed | |
Hepe02g2786 | Hepe-Chr2:76680066 | Hepe06g0891 | Hepe-Chr6:56192594 | 3.52e-127 | dispersed | |
Hepe06g0891 | Hepe-Chr6:56192594 | Hepe07g1910 | Hepe-Chr7:62827043 | 3.25e-74 | dispersed | |
Hepe01g1912 | Hepe-Chr1:83912803 | Hepe06g0891 | Hepe-Chr6:56192594 | 1.44e-51 | transposed | |
Hepe02g0398 | Hepe-Chr2:3817020 | Hepe06g0891 | Hepe-Chr6:56192594 | 2.77e-273 | wgd | |
Hepe06g0891 | Hepe-Chr6:56192594 | Hepe08g2053 | Hepe-Chr8:57646493 | 2.31e-79 | wgd | |
Hepe06g0891 | Hepe-Chr6:56192594 | Hepe09g1569 | Hepe-Chr9:42598454 | 7.89e-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72867 | PF07714 | PK_Tyr_Ser-Thr | 2.70E-75 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0891 | - | - | - | 0.0 |