Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0891 ATGCCGATTGAGGATGATGTTGAGAGCTGCGGTAGTCGACCCACCAACTCCTCCTCCTCCTCCTCTCATGCCAACCCGAGGCATCATCGCCAGAAGCTCGAGGTTTACAATGAAGTCCTCCGTCGAATTCAGGAATCCAATTCCTATGAGGCCAATCTCCCTGGCTTTCATCATCACCTTTGGCTCCATTTCAATCGCCTCCCTGCTCGATACGCATTGGATGTGAATGTCGATAGGGCGGAAGATGTACTCACACATAAGAGATTACTTCAATTGGCTGTAGACCCTGCTAACCGACCTGCATTTGAAGTTCGTTCTGTGCAGGTTTATCCTTCTGCTAATGATAACCTTATCAATTCTTCTTGTTTGGATTCTTCAATGATGGAAGATGCTCAGAGCTCTTATAATTGTTCTAATAGACAGGGGAACCATCCACCTCCAACCTTTGGTTCTTCACCTAATCTTGAAGCACTTGCACTTCAGGCCAGCAAGTATGTTGTTGAAGATAGGGACAGTGCGGCACCCTGCTTTTCTCGGCCAATGCATGAGATCACATTTGCAACAAGTGACAAGCCTAAGGTCCTCAGTCAGTTAACTTCCTTACTAGCTGATGTTGGACTTAACATACAAGAAGCTCATGCTTTCTCCTCTGTTGATGGTTTCTCTCTGGATGTTTTTGTCATCGATGGTTGGCCTTATGAGGAAACCGAGGAGCTGAAAAGGGCATTAGAAAAAGAAATTTTAAATTTGAAGGAGCCATGTTGGACAGAAAAGCAGTCCAGTCCTGCTTTGGGTAAGCATAACCAGAATAGAGTTGAATCTTTTCCTAGTTCTGTTGAAATACCTACTGATGGTACTGATGTCTGGGAAATTGACACCAGACAACTAAAATTTGAGAATAAAGTTGGATCTGGGTCATATGGGGACCTGTATCGGGGCACGTATTGTAGTCAGGAAGTAGCTATTAAAGTACTGAAGCCTGAGCGTATTAATGAAGAGATGCTCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTCATTGGCGCTTGTACTAAACCTCCAAACCTATGCATCGTGACAGAGTTTATGTCGAGAGGAAGCATATATGACTTCCTTCATAAGCAAAGAGGTGTATTTAATCTTCCGTCTTTACTTAAAGTAGCCATTGATATTTCAAGAGGGATGAATTATTTGCATGAAAATAATATAATCCACCGTGACCTCAAGACTGCCAATCTTCTGATGGATGAAAACATGGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTTCAATCTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAGTCATTGAGCATAAACCTTATGGTAATAAGGCAGATGTTTTCAGTTTTGGAATAGCATTATGGGAGCTTTTAACTGGAGAAATTCCTTACTCATCCATGACCCCATTACAAGCAGCGGTTGGCGTGGTCCAGAAGAAACTGCGGCCTACAATGCCCAAGAATGCCCATCCCAATCTCGCCGAACTGCTTGAAAGATGCTGGCGACAGGATCCAACCGAACGGCCAAACTTCTCTGAAATTCTAGAGATCCTCAAGCAGATTTCAGAGCAGCCTTCAAAAGGAGGCACCATTGAATGCACTGGAGGAGCTTCAGAGGTGCAATGCTGCTGCTTTGAAGGAACAATAATGATGTCATTTGGAGAAAGCTTCAACAATCAGACTCTTCACTGTATCTGTTCAGAAGCTGCCGAGCGCGAACTCGAACCTGCAATCGAACCAATGCATGCATGA 1833 43.7 MPIEDDVESCGSRPTNSSSSSSHANPRHHRQKLEVYNEVLRRIQESNSYEANLPGFHHHLWLHFNRLPARYALDVNVDRAEDVLTHKRLLQLAVDPANRPAFEVRSVQVYPSANDNLINSSCLDSSMMEDAQSSYNCSNRQGNHPPPTFGSSPNLEALALQASKYVVEDRDSAAPCFSRPMHEITFATSDKPKVLSQLTSLLADVGLNIQEAHAFSSVDGFSLDVFVIDGWPYEETEELKRALEKEILNLKEPCWTEKQSSPALGKHNQNRVESFPSSVEIPTDGTDVWEIDTRQLKFENKVGSGSYGDLYRGTYCSQEVAIKVLKPERINEEMLKEFSQEVYIMRKVRHKNVVQFIGACTKPPNLCIVTEFMSRGSIYDFLHKQRGVFNLPSLLKVAIDISRGMNYLHENNIIHRDLKTANLLMDENMVVKVADFGVARVQSQSGVMTAETGTYRWMAPEVIEHKPYGNKADVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKKLRPTMPKNAHPNLAELLERCWRQDPTERPNFSEILEILKQISEQPSKGGTIECTGGASEVQCCCFEGTIMMSFGESFNNQTLHCICSEAAERELEPAIEPMHA 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 56192594 56201114 - Hsped.06g08910.1 Hepe06g0891 572266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0891 610 CDD STKc_MAP3K-like 302 545 - -
Hepe06g0891 610 PANTHER SERINE-THREONINE PROTEIN KINASE 51 548 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe06g0891 610 Pfam Protein tyrosine and serine/threonine kinase 296 545 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Hepe06g0891 610 Coils Coil 233 253 - -
Hepe06g0891 610 ProSiteProfiles ACT domain profile. 183 258 IPR002912 -
Hepe06g0891 610 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 MobiDBLite consensus disorder prediction 1 31 - -
Hepe06g0891 610 SMART serkin_6 296 548 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 CDD ACT_TyrKc 181 248 - -
Hepe06g0891 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 FunFam Serine/threonine-protein kinase isoform 1 286 374 - -
Hepe06g0891 610 SUPERFAMILY ACT-like 181 245 IPR045865 -
Hepe06g0891 610 ProSitePatterns Protein kinases ATP-binding region signature. 302 323 IPR017441 GO:0005524(InterPro)
Hepe06g0891 610 ProSiteProfiles Protein kinase domain profile. 296 548 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe06g0891 610 Gene3D Transferase(Phosphotransferase) domain 1 375 562 - -
Hepe06g0891 610 SUPERFAMILY Protein kinase-like (PK-like) 269 545 IPR011009 -
Hepe06g0891 610 MobiDBLite consensus disorder prediction 10 24 - -
Hepe06g0891 610 MobiDBLite consensus disorder prediction 133 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2309 Hepe-Chr1:87687402 Hepe06g0891 Hepe-Chr6:56192594 1.37e-221 dispersed
Hepe02g2786 Hepe-Chr2:76680066 Hepe06g0891 Hepe-Chr6:56192594 3.52e-127 dispersed
Hepe06g0891 Hepe-Chr6:56192594 Hepe07g1910 Hepe-Chr7:62827043 3.25e-74 dispersed
Hepe01g1912 Hepe-Chr1:83912803 Hepe06g0891 Hepe-Chr6:56192594 1.44e-51 transposed
Hepe02g0398 Hepe-Chr2:3817020 Hepe06g0891 Hepe-Chr6:56192594 2.77e-273 wgd
Hepe06g0891 Hepe-Chr6:56192594 Hepe08g2053 Hepe-Chr8:57646493 2.31e-79 wgd
Hepe06g0891 Hepe-Chr6:56192594 Hepe09g1569 Hepe-Chr9:42598454 7.89e-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72867 PF07714 PK_Tyr_Ser-Thr 2.70E-75 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0891 - - - 0.0