Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0898 ATGTTATCAAGTTTGATGAACTTCCTGAGGGCCTGCTGGCAGCCATGTGCTGATCGTCCATCTCGTCGAGGTGGTGGTTCCGATTCAGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCACCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAGGCCAATAATTTACTCGAGGATCAGAGCCAGCTTGAGTCTGGTCCCTTGAGCTTGCTCGAGTCTGGACCCTATGGAACCTTTGTAGGAATATACGATGGCCACGGTGGCCCCGAGACGTCGCGATTCATATGTAGTACCTTGTTCCAGCACCTCAAAGTGTTTGCAACAGAAGAAAAAGCAATGTCAGTAAATGTGATAAAGAACGCATTCCAAGCAACAGAAGAGGGGTTTCTCTCTATTGTCACCAAGCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGGTGTGATTTGTAATGGGAAACTCTACATTGCCAATCTCGGTGATTCCCGAGCTGTGTTGGGAAGGCTCGTTCGGTCCACCGGGGAAGTTCTTCCCATTCAGCTGTCAGCAGAACACAATGTAAGCATACAATCAGTCCGCCAGGAGATGCAGTCTTGGCACCCAGATGACCCCCGGATCGTAGTGTTGAAGCATAATGTATGGCGCGTAAGGGGCTTGATTCAGATTTCTCGATCGATTGGAGACGTATATCTCAAAAAGCCAGAATTTAACCGGGAGCCTTTGTATGCTAAGTTTCGCCTCCGAGAACCCTTCAGTAGGCCTATTTTGAGCTCGGAACCCGCAATCTCTGTCCACGAACTTGATCCTAACGATCAATTCCTCATATTTGCTTCTGATGGGCTGTGGGAGCACCTTAGCAACCAGGATGCAGTTAATATAGTTCACAAGCATCCTCACAGTGGAAGTGCAAAGAGGCTGGTGAAAGCAGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGCTACTCGGACTTGAAGAAGATCGACCGTGGGGTTCGGCGTCATTTTCACGATGACACAACGGTGATAGTCGTGTTTCTGGGATCGAGCAGAGGGAGCAGTGGTACAGCAGCAGGGGGAAGAAGCCCTGTTTTGTCAGTGAGAGGGGGAGGAATGAACCTACCTGCAAAGTCTCTAGCACCTTCAGAGCTCAACACTGCCCCTCAATGA 1200 49.5 MLSSLMNFLRACWQPCADRPSRRGGGSDSVGCQDGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFVGIYDGHGGPETSRFICSTLFQHLKVFATEEKAMSVNVIKNAFQATEEGFLSIVTKQWPMNPQIAAVGSCCLVGVICNGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSAEHNVSIQSVRQEMQSWHPDDPRIVVLKHNVWRVRGLIQISRSIGDVYLKKPEFNREPLYAKFRLREPFSRPILSSEPAISVHELDPNDQFLIFASDGLWEHLSNQDAVNIVHKHPHSGSAKRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSRGSSGTAAGGRSPVLSVRGGGMNLPAKSLAPSELNTAPQ 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 56257293 56260907 - Hsped.06g08980.1 Hepe06g0898 572273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0898 399 CDD PP2Cc 81 357 IPR001932 -
Hepe06g0898 399 PANTHER PROTEIN PHOSPHATASE 42 356 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe06g0898 399 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Hepe06g0898 399 SUPERFAMILY PP2C-like 61 358 IPR036457 -
Hepe06g0898 399 FunFam Phosphatase 2C family protein 38 366 - -
Hepe06g0898 399 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169(InterPro)
Hepe06g0898 399 Gene3D - 39 363 IPR036457 -
Hepe06g0898 399 Pfam Protein phosphatase 2C 82 326 IPR001932 -
Hepe06g0898 399 SMART PP2C_4 41 355 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0040 Hepe-Chr3:478916 Hepe06g0898 Hepe-Chr6:56257293 1.33e-143 dispersed
Hepe05g0524 Hepe-Chr5:7220977 Hepe06g0898 Hepe-Chr6:56257293 3.84e-133 dispersed
Hepe06g0898 Hepe-Chr6:56257293 Hepe10g1335 Hepe-Chr10:49448469 1.33e-24 dispersed
Hepe02g0410 Hepe-Chr2:3911144 Hepe06g0898 Hepe-Chr6:56257293 2.01e-198 wgd
Hepe04g1630 Hepe-Chr4:71680648 Hepe06g0898 Hepe-Chr6:56257293 8.29e-207 wgd
Hepe06g0898 Hepe-Chr6:56257293 Hepe08g0307 Hepe-Chr8:2764993 3.42e-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0898 K01102 - csv:101220137 704.901