Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0917 ATGTCCACTCCCTTGAGGAAGGTGTTTTGTAGAATTTCAGGGCTTGCAACTTCTCTGAGAAGAAACACAGCCCCTCACAGCAGAAGAATCTTTCACAGAGATGTTGAACAACAAGAGTTTCAATATGCAAGCTCTCATTGCCTCTCTTCTTACTACAGTGTCTTTGTTGCTCGCCTTGCCATTATGGTGATGCTAGCTATTTTGATTGGGCTGCTGACAATACTCACATGGCATTTCACAAAGAGCTACACGGCACAGTCTCTGGACAGCTTAGCATATGGTCTTCGTCATGAACTGCTGCAGCGCCCGATCTTACGGATGTGGAGTGTCTTGAATTCCACTGCTGAAATAACCACAGCTCAGGTTAAGCTTTCAGAATATGTAATGAAGAAGTACAGCAAGCCCGTGAATCAAGCAGAGCAAGTTGAGTTGTATGAAGCAATGAGGGATGTTACGTGGGCGATGTTTGCAAGTCGAAAAGCTCTTAATGCCATAACCATCAATTACAAGAATGGCTTTGTCCAGGCATTCCATCGAGATCATAGAAGCAACAATACATTTTATATTTACTCAGATCTTGCAAACTATTCTATCAGTGCCACTGAATCGTATAATATCAATCGGCTTTCGTCGGGGGAAGGGTGGTCGGAGCCACCCATACATGGCAATATTTCTGCAAAATGGTACCGGGAACCGCTTGATCCTATTACCGGCGAGAAGATCGGGAAAGCAAGGCAAATGCCACCAGAGGACTTGATTAATATTGCTGGCATTTCACAGGTGGCAGATGGTGTTGCCTCATGGCATGTTACGGTGAGCAAGTACATGGATACACCATTGCTTTCGGCAGCCCTGCCTGTTTCCGATGCTTCGAATGAAAGCATTGTTGCAGTGGTGGGCGTTACAACCGCACTTTATAGCGTAGGTCAACTTATGAAGGAGCTTGTTGAGTTCCATAGTGGACATATTTATCTAACCTCTCAAGAGGGCTACTTGCTTGCTACTTCAGCCAATGCTCCCCTGCTAAGAAATACATCAAGGGGTCCAAAGCTTATGATGGCTGTTGATTCCCAGGACGATGTGATTCGATTAGGAGCTGAGTGGTTACAGAAAACCTATGGAAACAATTTTCCTCCTGGTCATGAGGTCCATGAAGAGAATGTCAAGCTTGGTGATCAGCAATATTACATCGACTCATTTTTTCTTAATCTAAAGAGGCTTCCTATTGTGGGGGTTGTCATCATTCCTAGACAATACATAATGGGCAAGGTCGATGAGAGAGCTTACAAAACATTGATTATACTGATTTCTGCATCCTTGTGCATCTTGGTTATTGGGTGTCTATGCATTTTGATTCTGACAAAAGGAGTATCTAAGGAAATGAAACTAAGGGCAGAACTAATAAGCCATCTTGATGCAAGAAGAAGGGCGGAGGCATCTAGTAATTACAAGAGTCAATTTCTAGCGAATATGAGTCATGAGCTGAGGACGCCGATGGCTGCTGTAATTGGACTGCTGGACATTCTAATGTGTGATGACTGTCTCAATAATGAACAATTTTCTACGGTTACTCAGATTAGAAAATGCTCAACAGCTCTACTCCGACTTCTCAACAACATTCTAGATCTAAGCAAGGTTGAATCTGGAAAGCTGGTTTTGGAAGATGCAGAATTTGACCTTGGACGAGAACTCGAAGGGCTTGTTGATATGTTCTCTGTGCAGTGCATTAACCATAATGTGGAGACTGTATTGGATCTCTCTGATGATATGCCGAAATTAGTTCGAGGAGACTCTGGTCGAGTTGTTCAAATATTCACAAATTTGATCAGCAATTCTATCAAATTCACAACTACTGGTCACATCATTCTTCGAGGGTGGTGTGAGACGTCAAATACTCTTAATGAAACGAGCAAGTTTTGTATGGATCAGAAGAAATTACGGTTTCCAAATCGGACAAAGATGAAACAGCAGGGAGACCACACAAGGAATGCCAGCAAGAGAGATAACAAAATGACCTTGTGGTTTGAACTTGATGACACTGGATGTGGGATTGATCCAAGCAAATGGGAGTCCGTTTTTGAAAGCTTTGAGCAAGCAGATCCCTCGACAACCCGAACGCATGGTGGCACGGGTCTTGGACTATGCATCGTACGTACCTTGGTTAACAAGATGGGTGGAGAAATCAAGGTTGTAAAGAAAAACGGCCCAGGAACTCTAATGCGACTTTATTTGGTTCTCAGCACGCCTGTAGGCTCTACAGATCATCACTGTCAGCTTGATTTTGCAAAACATAATGCAGTGGTACTGCTTGCACTCCGTGGCAGCATGAGTCGATTAATCACGTCACAGTGGCTTCGTAAAATCGGACTGCGCACTTTAGAAGCTTCGGAATGGAACGAACTAACACTAATCCTTCAGGAACTCTTTCAAGCCAGAAGTTCAGAAAGTAAAAAAGGATTTAGTCCACAGGATTCACTAGGTGAACCATTACGAGCAGAGTTGATGAGAATTAAAGATGTGAAAAGCCAAATATTCATCATTGTTGCCGATATCGGGATACTGGACTTGAGCACGGATATTTGGAAGGACCAACTTTACTTCCTTGACAAGTACTCTGGAAAAGCAAAATTTGCATGGATGTTAAACCACGATACGTCCAACGCCATAAAGATGGAGCTCCGGGGAAAAGGGCACATTATAATGAACAATAAGGCACTGTACAGAGCAAAAATGATTCATATTTTGGAAGCTGTTATGAAGGACAGAAATCTTGAGTTGCAGAGGAAAAATGCTTTAAGAACTGCATCAAAAGAAGGGGATTATCATGAATGTCTTGAAATTGATTCCACTCAGTTTGAAACTGCCAGCTCTGATGATTCTGATGTATTTGAACTTGGCAATTCCAACTCTCAGTGTGCAACATTTCAAGTCAGAGACGGCCAAGAAGAAACGATAGCGGAACCACGTCAGTCACCATTTCTGCCCGTTAACAATAGCTTAGTTGAGTTAACTCATGTACATTCGAGTGAGAGTAATGTGAGGACCGGCGATCCATGTGACACTAGACAAAGCTCATCGAAGCCTCAATGTCTAAGTTCTGAATCCAATGGACAGAACTTGGGATGCAACTATCCTAAAAGCCAAGGAGAATCACATTCTAAGGACGTTCATGGTAAAAAATCTCTTGAAGGGCTACGCATTTTGCTTGCAGAAGATACACCAGTTCTCCAAAGAGTAACGACCATAATGCTCGAAAAGATGGGAGCCACGGTCATTGCTGTCGGAGACGGACTGCTGGCTGTAGAAGCTCTGACTGCCATGCTCAGTGATGAAGAGCAAAGAAGAGAATGCCCCATAAGATATGACTTGATATTAATGGATTGCCAAATGCCAAAGATGGACGGCTACGAAGCAACAAAAGCAATTAGAAAGCTAGAGGTGGGAACGAGCCTTCACATTCCGATTGTAGCATTGACAGCCCACGCAATGTCGTCGGATGAAGCCAAATGCTTGGAGGTGGGAATGGATGCATACCTGACAAAGCCAATTGACTATAAGCTGATGGTATCCACCATACTTTCCCTCACTCAAAGAAGAGGCTAA 3603 43.3 MSTPLRKVFCRISGLATSLRRNTAPHSRRIFHRDVEQQEFQYASSHCLSSYYSVFVARLAIMVMLAILIGLLTILTWHFTKSYTAQSLDSLAYGLRHELLQRPILRMWSVLNSTAEITTAQVKLSEYVMKKYSKPVNQAEQVELYEAMRDVTWAMFASRKALNAITINYKNGFVQAFHRDHRSNNTFYIYSDLANYSISATESYNINRLSSGEGWSEPPIHGNISAKWYREPLDPITGEKIGKARQMPPEDLINIAGISQVADGVASWHVTVSKYMDTPLLSAALPVSDASNESIVAVVGVTTALYSVGQLMKELVEFHSGHIYLTSQEGYLLATSANAPLLRNTSRGPKLMMAVDSQDDVIRLGAEWLQKTYGNNFPPGHEVHEENVKLGDQQYYIDSFFLNLKRLPIVGVVIIPRQYIMGKVDERAYKTLIILISASLCILVIGCLCILILTKGVSKEMKLRAELISHLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILMCDDCLNNEQFSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQIFTNLISNSIKFTTTGHIILRGWCETSNTLNETSKFCMDQKKLRFPNRTKMKQQGDHTRNASKRDNKMTLWFELDDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVNKMGGEIKVVKKNGPGTLMRLYLVLSTPVGSTDHHCQLDFAKHNAVVLLALRGSMSRLITSQWLRKIGLRTLEASEWNELTLILQELFQARSSESKKGFSPQDSLGEPLRAELMRIKDVKSQIFIIVADIGILDLSTDIWKDQLYFLDKYSGKAKFAWMLNHDTSNAIKMELRGKGHIIMNNKALYRAKMIHILEAVMKDRNLELQRKNALRTASKEGDYHECLEIDSTQFETASSDDSDVFELGNSNSQCATFQVRDGQEETIAEPRQSPFLPVNNSLVELTHVHSSESNVRTGDPCDTRQSSSKPQCLSSESNGQNLGCNYPKSQGESHSKDVHGKKSLEGLRILLAEDTPVLQRVTTIMLEKMGATVIAVGDGLLAVEALTAMLSDEEQRRECPIRYDLILMDCQMPKMDGYEATKAIRKLEVGTSLHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDYKLMVSTILSLTQRRG 1200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 56660653 56667764 - Hsped.06g09170.1 Hepe06g0917 572292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0917 1200 CDD HisKA 484 545 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe06g0917 1200 FunFam Histidine kinase 1-like protein 471 550 - -
Hepe06g0917 1200 MobiDBLite consensus disorder prediction 1007 1057 - -
Hepe06g0917 1200 Gene3D - 1044 1198 - -
Hepe06g0917 1200 Pfam His Kinase A (phospho-acceptor) domain 484 549 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe06g0917 1200 CDD REC_hyHK_CKI1_RcsC-like 1067 1192 - -
Hepe06g0917 1200 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 596 745 IPR003594 -
Hepe06g0917 1200 ProSiteProfiles Histidine kinase domain profile. 490 748 IPR005467 -
Hepe06g0917 1200 SMART REC_2 1065 1192 IPR001789 GO:0000160(InterPro)
Hepe06g0917 1200 MobiDBLite consensus disorder prediction 1007 1049 - -
Hepe06g0917 1200 SMART HKATPase_4 596 748 IPR003594 -
Hepe06g0917 1200 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 471 550 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe06g0917 1200 SUPERFAMILY CheY-like 1063 1198 IPR011006 -
Hepe06g0917 1200 PANTHER TWO-COMPONENT HISTIDINE KINASE 57 752 IPR050736 -
Hepe06g0917 1200 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 538 744 IPR036890 -
Hepe06g0917 1200 Gene3D - 471 550 - -
Hepe06g0917 1200 Gene3D - 551 749 IPR036890 -
Hepe06g0917 1200 PRINTS Bacterial sensor protein C-terminal signature 673 687 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Hepe06g0917 1200 PRINTS Bacterial sensor protein C-terminal signature 691 701 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Hepe06g0917 1200 PRINTS Bacterial sensor protein C-terminal signature 708 726 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Hepe06g0917 1200 ProSiteProfiles Response regulatory domain profile. 1066 1196 IPR001789 GO:0000160(InterPro)
Hepe06g0917 1200 SMART HisKA_10 483 549 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe06g0917 1200 Pfam Response regulator receiver domain 1067 1191 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1628 Hepe-Chr5:66138906 Hepe06g0917 Hepe-Chr6:56660653 1.44e-11 dispersed
Hepe06g0917 Hepe-Chr6:56660653 Hepe08g0395 Hepe-Chr8:3532040 2.78e-37 dispersed
Hepe08g2256 Hepe-Chr8:62305622 Hepe06g0917 Hepe-Chr6:56660653 2.73e-70 transposed
Hepe06g0917 Hepe-Chr6:56660653 Hepe08g2051 Hepe-Chr8:57568600 2.50e-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55759 PF02518 HATPase_c 6.20E-23 CL0025 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0917 - - - 0.0