Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0920 ATGGTAGAACAGGGACGATCCTTGGCCGTCACTCCGACATGGGCTTTTGCGACGGTGGTTACTCTCATGGTTTCTCTTGGATTCTTCTTCCAAGGCACGTTGACACGGACCAGAAAGTGGTTGAATCGGACGAAGAGGAAGTCGTTACTCGCTGCGTTGGAGAAGATTAAAGAAGAGCTGATGCTCTTTGGACTTCTGTCGTTGTTGATGGGCCACTGGATTGTTTTTGTTGCAAGAATTTGTGTTAAGTCGTCAATGTTGAGCAGCCGTTTCTATCCCTGTGCGTTAGAGACTGATCTGAAACGAGTTAGACACATTTTTATTGCAAGTGAAATCGTGAACAGTTCTGTGCCAAGGGAGCATAATCATGCTGGGATACGAGAGTATTGTCCTGAGGGTCGTGAATCGTTTGCTTCATATGAGAGTTTAGAGCAGCTTCATCGATTAATATTCGTTCTCGGCATCACTCATGTTTCGTATAGCTTCATTGCCATTGCCCTGGCTATGATTAAGATATATGGCTGGAGAACATGGGAAAATGAAGCTAAGGCTTTGGCCATTCAGAACGCACAAGAAGAATCTGTACAAGCATCATCAACTGGACCAAAAATAAGGCGACTATCGACTTTTGTCTTTCACCATGCCTCTCATCCATGGAGTCAGCATAGAGTCCTTGTTTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCTATCAATCGAGCTGATTACATGGCTTTGCGGTTGGGCTTCATCAGTACTCATCAACTCCCTATATCATATGACTTCCATAACTATATGCTTCGAAGCATGGAGGAAGAATTTCGCGATATGGTTGGTATAAGTGTGCCACTCTGGATATATGCCATTGCCTGCATCTTCCTCAACTTCCATGGAAGCCATATTTACTTTTGGGTTTCCTTCCTCCCAGCTATTTTGATTCTGCTGGTCGGGACGAAACTGCACCGGGTAGTGGTAAAGTTGGCTGTAGAAGTTGTGGATACATCTCCAAGGGGATATTCTCGTTTTAACTTGAGGGATGAGCTGTTTTGGTTTGGGAAGCCTAAGCTTCTTTTATGGTTGATACAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGTGGGAAATTAGGGAACCCTATTGTTTCATGGAGAACCAAACATATGTTGCTATCCGCTTGACCTTTGGGGTTACCACTCAGTTTTGGTGTAGCTTTATTACATTTCCACTTTATGTTATAGTAACTCAGATGGGGTCGAAGTTCAAGAAATCACTTCTATCAGAGAATGTCCGAAACTCGCTTCATCGATGGAAAAGAAGAGTGAAGGCAAGGCCGGGTGCTTCTTCCTCGGTTGCACTTGTGGGTGCAACATCACTTTCATCCACTGGTTGTACATTGGATGATGAAGGTCAGACGACCGATGACTTTACTGCGAACTGCTCGGAAGGAAGCACGTCAAGCGCTGCCCGATACACACATTTCTCTCAGTTATTTCAGCAAGCTTCGTCGGACGACAGACATACAAATATCTGTTAG 1557 44.44 MVEQGRSLAVTPTWAFATVVTLMVSLGFFFQGTLTRTRKWLNRTKRKSLLAALEKIKEELMLFGLLSLLMGHWIVFVARICVKSSMLSSRFYPCALETDLKRVRHIFIASEIVNSSVPREHNHAGIREYCPEGRESFASYESLEQLHRLIFVLGITHVSYSFIAIALAMIKIYGWRTWENEAKALAIQNAQEESVQASSTGPKIRRLSTFVFHHASHPWSQHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHQLPISYDFHNYMLRSMEEEFRDMVGISVPLWIYAIACIFLNFHGSHIYFWVSFLPAILILLVGTKLHRVVVKLAVEVVDTSPRGYSRFNLRDELFWFGKPKLLLWLIQFISFQNAFEMATFIWSLWEIREPYCFMENQTYVAIRLTFGVTTQFWCSFITFPLYVIVTQMGSKFKKSLLSENVRNSLHRWKRRVKARPGASSSVALVGATSLSSTGCTLDDEGQTTDDFTANCSEGSTSSAARYTHFSQLFQQASSDDRHTNIC 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 56696414 56700859 - Hsped.06g09200.1 Hepe06g0920 572295

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0920 518 PANTHER MLO-LIKE PROTEIN 1 3 492 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Hepe06g0920 518 Pfam Mlo family 5 459 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0920 K08472 - - csv:101217051 920.998
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0920 Hepe-Chr6:56696414 Hepe07g0512 Hepe-Chr7:5410406 6.57e-168 dispersed
Hepe06g0920 Hepe-Chr6:56696414 Hepe06g0856 Hepe-Chr6:55470518 2.06e-79 transposed
Hepe06g0920 Hepe-Chr6:56696414 Hepe04g1676 Hepe-Chr4:71959229 3.60e-79 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe02g3124 . 3 553 MLO family AT5G53760 70.3 1.6e-219 759.2
Hepe01g1377 . 10 510 MLO family AT5G53760 62.8 3.4e-185 645.2
Hepe07g0512 . 7 466 MLO family AT5G53760 50.6 5.7e-124 441.8
Hepe10g1101 . 10 500 MLO family AT3G45290 53.4 7.2e-139 491.1
Hepe02g3124 . 3 553 MLO family AT1G26700 68.9 6.3e-213 737.3
Hepe01g1377 . 1 510 MLO family AT1G26700 60.5 9.8e-182 633.6
Hepe01g1015 . 7 539 MLO family AT2G39200 64.7 3.9e-197 684.9
Hepe10g1105 . 4 532 MLO family AT2G39200 62.8 1.6e-190 662.9
Hepe08g0876 . 1 167 MLO family AT2G39200 67.9 4.7e-62 236.1
Hepe10g1105 . 1 412 MLO family AT1G61560 64.7 1.5e-155 546.2
Hepe01g1015 . 7 408 MLO family AT1G61560 65.1 3.2e-153 538.5
Hepe04g1676 . 29 423 MLO family AT1G61560 52.9 5.4e-116 414.8
Hepe04g1676 . 11 481 MLO family AT2G17430 63.9 1.1e-172 603.6
Hepe06g0856 . 31 491 MLO family AT2G17430 63.2 7.4e-158 554.3
Hepe08g1516 . 2 478 MLO family AT2G17430 57.1 2.4e-148 522.7
Hepe10g1105 . 3 454 MLO family AT2G17430 50.7 2.0e-123 439.9
Hepe04g1676 . 7 569 MLO family AT2G17480 63.4 1.8e-197 686.0
Hepe06g0856 . 31 575 MLO family AT2G17480 60.3 2.3e-176 615.9
Hepe08g1516 . 12 463 MLO family AT2G17480 59.5 6.2e-150 528.1
Hepe10g1105 . 10 459 MLO family AT2G17480 52.1 1.1e-125 447.6
Hepe08g1516 . 12 379 MLO family AT1G42560 60.4 9.0e-126 447.2
Hepe04g1676 . 29 387 MLO family AT1G42560 59.3 2.3e-121 432.6
Hepe06g0856 . 31 390 MLO family AT1G42560 55.9 8.1e-111 397.5
Hepe04g1676 . 9 388 MLO family AT5G65970 65.8 2.3e-142 502.7
Hepe06g0856 . 29 390 MLO family AT5G65970 65.2 1.3e-134 476.9
Hepe08g1516 . 9 379 MLO family AT5G65970 57.5 4.3e-117 418.7
Hepe10g1105 . 2 377 MLO family AT5G65970 51.1 5.1e-102 368.6
Hepe08g1516 . 2 533 MLO family AT2G33670 59.3 4.4e-173 604.7
Hepe04g1676 . 21 471 MLO family AT2G33670 61.5 4.2e-155 545.0
Hepe06g0856 . 31 473 MLO family AT2G33670 57.6 8.4e-140 494.2
Hepe08g0876 . 1 145 MLO family AT2G33670 53.1 5.8e-40 162.5
Hepe01g1015 . 64 527 MLO family AT1G11310 65.5 5.3e-174 607.8
Hepe10g1105 . 63 502 MLO family AT1G11310 64.0 3.8e-164 575.1
Hepe08g0876 . 1 182 MLO family AT1G11310 61.6 2.0e-59 227.3
Hepe07g0512 . 3 556 MLO family AT1G11000 67.0 1.7e-213 739.2
Hepe06g0920 . 1 458 MLO family AT1G11000 54.2 2.5e-132 469.5
Hepe01g1015 . 64 527 MLO family AT1G11310 65.5 5.3e-174 607.8
Hepe10g1105 . 63 502 MLO family AT1G11310 64.0 3.8e-164 575.1
Hepe08g0876 . 1 182 MLO family AT1G11310 61.6 2.0e-59 227.3
Hepe10g1101 . 10 500 MLO family AT3G45290 53.4 7.2e-139 491.1
Hepe07g0512 . 3 556 MLO family AT1G11000 67.0 1.7e-213 739.2
Hepe06g0920 . 1 458 MLO family AT1G11000 54.2 2.5e-132 469.5
Hepe08g1516 . 2 533 MLO family AT2G33670 59.3 4.4e-173 604.7
Hepe04g1676 . 21 471 MLO family AT2G33670 61.5 4.2e-155 545.0
Hepe06g0856 . 31 473 MLO family AT2G33670 57.6 8.4e-140 494.2
Hepe08g0876 . 1 145 MLO family AT2G33670 53.1 5.8e-40 162.5
Hepe10g1105 . 1 412 MLO family AT1G61560 64.7 1.5e-155 546.2
Hepe01g1015 . 7 408 MLO family AT1G61560 65.1 3.2e-153 538.5
Hepe04g1676 . 29 423 MLO family AT1G61560 52.9 5.4e-116 414.8
Hepe04g1676 . 11 481 MLO family AT2G17430 63.9 1.1e-172 603.6
Hepe06g0856 . 31 491 MLO family AT2G17430 63.2 7.4e-158 554.3
Hepe08g1516 . 2 478 MLO family AT2G17430 57.1 2.4e-148 522.7
Hepe10g1105 . 3 454 MLO family AT2G17430 50.7 2.0e-123 439.9
Hepe04g1676 . 7 569 MLO family AT2G17480 63.4 1.8e-197 686.0
Hepe06g0856 . 31 575 MLO family AT2G17480 60.3 2.3e-176 615.9
Hepe08g1516 . 12 463 MLO family AT2G17480 59.5 6.2e-150 528.1
Hepe10g1105 . 10 459 MLO family AT2G17480 52.1 1.1e-125 447.6
Hepe08g1516 . 12 379 MLO family AT1G42560 60.4 9.0e-126 447.2
Hepe04g1676 . 29 387 MLO family AT1G42560 59.3 2.3e-121 432.6
Hepe06g0856 . 31 390 MLO family AT1G42560 55.9 8.1e-111 397.5
Hepe04g1676 . 9 388 MLO family AT5G65970 65.8 2.3e-142 502.7
Hepe06g0856 . 29 390 MLO family AT5G65970 65.2 1.3e-134 476.9
Hepe08g1516 . 9 379 MLO family AT5G65970 57.5 4.3e-117 418.7
Hepe10g1105 . 2 377 MLO family AT5G65970 51.1 5.1e-102 368.6
Hepe02g3124 . 3 553 MLO family AT5G53760 70.3 1.6e-219 759.2
Hepe01g1377 . 10 510 MLO family AT5G53760 62.8 3.4e-185 645.2
Hepe07g0512 . 7 466 MLO family AT5G53760 50.6 5.7e-124 441.8
Hepe01g1015 . 7 539 MLO family AT2G39200 64.7 3.9e-197 684.9
Hepe10g1105 . 4 532 MLO family AT2G39200 62.8 1.6e-190 662.9
Hepe08g0876 . 1 167 MLO family AT2G39200 67.9 4.7e-62 236.1
Hepe02g3124 . 3 553 MLO family AT1G26700 68.9 6.3e-213 737.3
Hepe01g1377 . 1 510 MLO family AT1G26700 60.5 9.8e-182 633.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006348 3 0 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 2 1 36