Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0923 ATGGCTTCCATTATTTCTACTCCTCTTCTTTCTCTCTTCTTCTTCATCTCAGGTGTAAATTCAGCAACTTTCACCATATTAAACCAGTGTGGTTACACAGTTTGGCCGGGAGTTTTATCCGGCGCCGGCACATCACAGCTCGCCACCACTGGCTTCGTCCTGCAGCCAGGAGAGTCCAACGGCCTCGCCATGCCGCCCTCATGGTCCGGTCGCATTTGGGGCCGCACATATTGCTCCCAAGATGCCGCTGCCAGATTCTCCTGCGCAACTGCCGACTGCGGCTCCGGCACCGTCGAATGCAACGGTGCCGGTGCTGCCCCGCCCGCCACCCTCGCTGAGTTCACGCTGAATGGTGCGGGCGGGCTTGATTTCTACGATGTTAGTCTCGTCGATGGCTACAATGTGCCCATGTTAATCACCCCGCAGGATGAAACAGCAGGTGGGGGAAATTGCACGACGATCGGGTGTGCGGTAGATTTAAATAGTGAGTGTCCAGCAGAGTTAAGAGTGGTGGCGAGCGACGCAAGTGGGCGGAGTGTGGCTTGTAAGAGCGCGTGTGGGGCATTTGGTGAGGCACAATATTGTTGTAGTGGTGAATATGGGAACCCAAACACTTGTCGGCCGACGTCGTACTCGGAGTTCTTCAAGTCGGCATGTCCGCAGGCTTGTAGTTATGCATACGATGACGGAACCAGCACCTTCACTTGCGCCTCTGCCAATTACCTCATCACCTTTTGTCCTTCTCTTACAACAAGTGTGAAATCATCAAACGGGCAGTACCCGCGGGCAGTGGATGTCTCAAGAGCCGAGCATTCGGGCAGGCCGTTAACGTCAGTAGCCGTTATCTCCACCGTTACGGCAGTTTTAAGTCGGCGATTTTTGCGGCTCTATTAA 894 54.36 MASIISTPLLSLFFFISGVNSATFTILNQCGYTVWPGVLSGAGTSQLATTGFVLQPGESNGLAMPPSWSGRIWGRTYCSQDAAARFSCATADCGSGTVECNGAGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNVPMLITPQDETAGGGNCTTIGCAVDLNSECPAELRVVASDASGRSVACKSACGAFGEAQYCCSGEYGNPNTCRPTSYSEFFKSACPQACSYAYDDGTSTFTCASANYLITFCPSLTTSVKSSNGQYPRAVDVSRAEHSGRPLTSVAVISTVTAVLSRRFLRLY 297
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 56775009 56782410 - Hsped.06g09230.1 Hepe06g0923 572298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0923 297 ProSiteProfiles Thaumatin family profile. 21 247 IPR001938 -
Hepe06g0923 297 PRINTS Pathogenesis-related protein signature 23 35 IPR001938 -
Hepe06g0923 297 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Hepe06g0923 297 PRINTS Pathogenesis-related protein signature 71 82 IPR001938 -
Hepe06g0923 297 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Hepe06g0923 297 CDD TLP-PA 23 246 - -
Hepe06g0923 297 PANTHER OS03G0233200 PROTEIN 11 247 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Hepe06g0923 297 SUPERFAMILY Osmotin, thaumatin-like protein 22 248 IPR037176 -
Hepe06g0923 297 SMART tha2 24 247 IPR001938 -
Hepe06g0923 297 FunFam THAUMATIN-LIKE PROTEIN 1 22 247 - -
Hepe06g0923 297 PIRSF PR5 1 290 IPR001938 -
Hepe06g0923 297 Pfam Thaumatin family 28 247 IPR001938 -
Hepe06g0923 297 Gene3D Thaumatin 22 247 IPR037176 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0981 Hepe-Chr4:64268770 Hepe06g0923 Hepe-Chr6:56775009 1.47e-87 dispersed
Hepe06g0923 Hepe-Chr6:56775009 Hepe10g0160 Hepe-Chr10:1635964 1.79e-106 dispersed
Hepe06g0921 Hepe-Chr6:56711387 Hepe06g0923 Hepe-Chr6:56775009 2.69e-97 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0923 - - - 0.0