Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe06g0923 | ATGGCTTCCATTATTTCTACTCCTCTTCTTTCTCTCTTCTTCTTCATCTCAGGTGTAAATTCAGCAACTTTCACCATATTAAACCAGTGTGGTTACACAGTTTGGCCGGGAGTTTTATCCGGCGCCGGCACATCACAGCTCGCCACCACTGGCTTCGTCCTGCAGCCAGGAGAGTCCAACGGCCTCGCCATGCCGCCCTCATGGTCCGGTCGCATTTGGGGCCGCACATATTGCTCCCAAGATGCCGCTGCCAGATTCTCCTGCGCAACTGCCGACTGCGGCTCCGGCACCGTCGAATGCAACGGTGCCGGTGCTGCCCCGCCCGCCACCCTCGCTGAGTTCACGCTGAATGGTGCGGGCGGGCTTGATTTCTACGATGTTAGTCTCGTCGATGGCTACAATGTGCCCATGTTAATCACCCCGCAGGATGAAACAGCAGGTGGGGGAAATTGCACGACGATCGGGTGTGCGGTAGATTTAAATAGTGAGTGTCCAGCAGAGTTAAGAGTGGTGGCGAGCGACGCAAGTGGGCGGAGTGTGGCTTGTAAGAGCGCGTGTGGGGCATTTGGTGAGGCACAATATTGTTGTAGTGGTGAATATGGGAACCCAAACACTTGTCGGCCGACGTCGTACTCGGAGTTCTTCAAGTCGGCATGTCCGCAGGCTTGTAGTTATGCATACGATGACGGAACCAGCACCTTCACTTGCGCCTCTGCCAATTACCTCATCACCTTTTGTCCTTCTCTTACAACAAGTGTGAAATCATCAAACGGGCAGTACCCGCGGGCAGTGGATGTCTCAAGAGCCGAGCATTCGGGCAGGCCGTTAACGTCAGTAGCCGTTATCTCCACCGTTACGGCAGTTTTAAGTCGGCGATTTTTGCGGCTCTATTAA | 894 | 54.36 | MASIISTPLLSLFFFISGVNSATFTILNQCGYTVWPGVLSGAGTSQLATTGFVLQPGESNGLAMPPSWSGRIWGRTYCSQDAAARFSCATADCGSGTVECNGAGAAPPATLAEFTLNGAGGLDFYDVSLVDGYNVPMLITPQDETAGGGNCTTIGCAVDLNSECPAELRVVASDASGRSVACKSACGAFGEAQYCCSGEYGNPNTCRPTSYSEFFKSACPQACSYAYDDGTSTFTCASANYLITFCPSLTTSVKSSNGQYPRAVDVSRAEHSGRPLTSVAVISTVTAVLSRRFLRLY | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 56775009 | 56782410 | - | Hsped.06g09230.1 | Hepe06g0923 | 572298 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe06g0923 | 297 | ProSiteProfiles | Thaumatin family profile. | 21 | 247 | IPR001938 | - | |
Hepe06g0923 | 297 | PRINTS | Pathogenesis-related protein signature | 23 | 35 | IPR001938 | - | |
Hepe06g0923 | 297 | PRINTS | Pathogenesis-related protein signature | 123 | 139 | IPR001938 | - | |
Hepe06g0923 | 297 | PRINTS | Pathogenesis-related protein signature | 71 | 82 | IPR001938 | - | |
Hepe06g0923 | 297 | PRINTS | Pathogenesis-related protein signature | 237 | 246 | IPR001938 | - | |
Hepe06g0923 | 297 | CDD | TLP-PA | 23 | 246 | - | - | |
Hepe06g0923 | 297 | PANTHER | OS03G0233200 PROTEIN | 11 | 247 | IPR001938 | GO:0005576(PANTHER)|GO:0006952(PANTHER) | |
Hepe06g0923 | 297 | SUPERFAMILY | Osmotin, thaumatin-like protein | 22 | 248 | IPR037176 | - | |
Hepe06g0923 | 297 | SMART | tha2 | 24 | 247 | IPR001938 | - | |
Hepe06g0923 | 297 | FunFam | THAUMATIN-LIKE PROTEIN 1 | 22 | 247 | - | - | |
Hepe06g0923 | 297 | PIRSF | PR5 | 1 | 290 | IPR001938 | - | |
Hepe06g0923 | 297 | Pfam | Thaumatin family | 28 | 247 | IPR001938 | - | |
Hepe06g0923 | 297 | Gene3D | Thaumatin | 22 | 247 | IPR037176 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g0981 | Hepe-Chr4:64268770 | Hepe06g0923 | Hepe-Chr6:56775009 | 1.47e-87 | dispersed | |
Hepe06g0923 | Hepe-Chr6:56775009 | Hepe10g0160 | Hepe-Chr10:1635964 | 1.79e-106 | dispersed | |
Hepe06g0921 | Hepe-Chr6:56711387 | Hepe06g0923 | Hepe-Chr6:56775009 | 2.69e-97 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe06g0923 | - | - | - | 0.0 |