Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0963 ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGGGCTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATTAAAGACATGGCGTTGAAATTCTCTGGTGCTTATAAGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTACAAGAAAGGACAGCGACCTTACCCAGATTTTGACACAGCTTCAGAAGGGGTACCATACCCTTATATTGGAGGGGCAAGTGCAAGTTCAACGCCTGCTTGGGACTTCCCTCCGGTGAATAGGCACCCACATAACAGATCTGAGTCAAGATTTAAAGGAGTATTCAGAGGAGACCAGACCCCAGGAGGTGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGTATTCGTTTCGATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGTGAGAACTATGACAGAATAACGGAGCTTTATAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGACGGGAGGGATTCTTCTTACTCAAAGATGGGAAGAGATAGTCCGATGACTTCGGCGAACAAAGATTGGACGCCAAGAAACTATAAACCTTCTGGAAGCAAAGGTTATTTCCCATCTGACCAGCATTTTGATCAAGGAAGCAGCCACAACTATGCAGGGTCAAGCGCCTATCAAGCAGGTGGCGCGAAAGGTGACATGTCATCTATGGAAGCATCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCATTAGCAATGCAAGCGACATCGAGGCGGAATGGGTCGAGGAAGATGAACCAGGGGTCTATATAACAATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGCGTCAGATTCAGCCGTGAAAGGTTCGGGGAGATGAACGCAAAGCAATGGTGGGAACAGAACAGGGAGAGAATCCAAGCTCAATATCTATAA 1089 48.12 MFTCIACTKQTDDGAEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHNRSESRFKGVFRGDQTPGGDSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFDREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSANKDWTPRNYKPSGSKGYFPSDQHFDQGSSHNYAGSSAYQAGGAKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEQNRERIQAQYL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 57272600 57279391 - Hsped.06g09630.1 Hepe06g0963 572338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0963 362 MobiDBLite consensus disorder prediction 251 268 - -
Hepe06g0963 362 MobiDBLite consensus disorder prediction 203 300 - -
Hepe06g0963 362 MobiDBLite consensus disorder prediction 102 123 - -
Hepe06g0963 362 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Hepe06g0963 362 ProSiteProfiles BRX domain profile. 307 362 IPR013591 -
Hepe06g0963 362 MobiDBLite consensus disorder prediction 223 240 - -
Hepe06g0963 362 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Hepe06g0963 362 Pfam Transcription factor regulating root and shoot growth via Pin3 306 361 IPR013591 -
Hepe06g0963 362 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 362 IPR044532 -
Hepe06g0963 362 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Hepe06g0963 362 MobiDBLite consensus disorder prediction 281 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0963 Hepe-Chr6:57272600 Hepe08g2685 Hepe-Chr8:68876945 8.01e-92 dispersed
Hepe06g0963 Hepe-Chr6:57272600 Hepe03g1440 Hepe-Chr3:71158499 2.34e-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0963 - - - 0.0