Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g0987 ATGAGTAGCAGTGTGATGGAAAAGCCACCAAAAGACAAGGAGACGAAGACACCGCCTCCTACTACCCAGGAGCAGCCTTCGACCACAAGCGCTGCCGCAGTTAATCCTGATTGGTCGGGTTTTCAGGCATATTCCCCAATTCCTCCGCATGGTTTCTTGGCATCAAGCCCCCAAGCCCACCCATATATGTGGGGAGTTCAGCATATCATGCCTCCTTATGGCACGCCTCCACATCCATATGTTGCAATGTATCCCCCTGGTGGCATATATGCTCATCCTTCCATTCCTCCGGGATCATATCCTTTTAGCCCATTTGCAATGCCTTCTCCAAATGGCATCACTGAGGCCTCTGGTAACACGGCAGGCAGCTTAGAGGGGGAGCTTAAGCCACCTGAATTGAAGGAAAAGCTGCCAATTAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACAGGGAAGAACAATGAGCTCGGTAAAACATCTGGAACATCTGCCAATGGAGCATACTCTAAGAGTGGGGAGAGTGCCAGCGAAGGTACAAGTGAAGGAAGCGATGCCAATTCTCAAAATGAATCACAACCTAAGTTAGGTTCCAGGCAAGACACTTTGGAAGGTGAAGTATCTCAGAATGGTAACTCTATGCATGGTACTCAAAATGGGGGATCTAATACTCAGGCAATGGCTGTCATTCCATTGGCAGCTGCTGGGGCCCCGGGAGTCGTTCCCGGTCCCACTACCAACTTAAATATTGGAATGGACTATTGGGGTGCATCATCCACTATCCCTGCAATGCGTGGAAAGGGTCCATCGACTCCAGTTGCTGGAGGATTAGTTGGATCTCGGGATAACGTACAGTCACAGCTTTGGTTGCAGGACGAGAGAGAGCTTAAAAGACAGAGAAGAAAGCAATCAAACAGAGAATCTGCACGACGATCCCGGTTACGCAAGCAGGCAGAATGTGACGAACTAGCGCACCGAGCTGAAGCCTTGCAAGAAGAAAATGCCAGTCTTAGGTCTGAAGTGAACCGGATAAGGAGTGAATACGAACAACTACTTTCAGAGAATGCTTCTCTGAAGGAAAGACTAGGGGAAGTTCCGGGAAATGAAGAACCAAGGGCCAGCAGGAACGGCCATGGCCAGCGTTCGAGTAAGGAAATCACACAACTTAAAGAGCAAGAGGTTGTGCAAGTTGGTAACAAGAAATGA 1212 48.6 MSSSVMEKPPKDKETKTPPPTTQEQPSTTSAAAVNPDWSGFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPSPNGITEASGNTAGSLEGELKPPELKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKSGESASEGTSEGSDANSQNESQPKLGSRQDTLEGEVSQNGNSMHGTQNGGSNTQAMAVIPLAAAGAPGVVPGPTTNLNIGMDYWGASSTIPAMRGKGPSTPVAGGLVGSRDNVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAHRAEALQEENASLRSEVNRIRSEYEQLLSENASLKERLGEVPGNEEPRASRNGHGQRSSKEITQLKEQEVVQVGNKK 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 57589689 57595138 + Hsped.06g09870.1 Hepe06g0987 572362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g0987 403 MobiDBLite consensus disorder prediction 297 316 - -
Hepe06g0987 403 Pfam G-box binding protein MFMR 11 96 IPR012900 -
Hepe06g0987 403 MobiDBLite consensus disorder prediction 357 403 - -
Hepe06g0987 403 CDD bZIP_plant_GBF1 300 350 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g0987 403 MobiDBLite consensus disorder prediction 114 225 - -
Hepe06g0987 403 MobiDBLite consensus disorder prediction 146 225 - -
Hepe06g0987 403 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 297 360 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g0987 403 MobiDBLite consensus disorder prediction 376 390 - -
Hepe06g0987 403 Gene3D - 298 352 - -
Hepe06g0987 403 SMART brlzneu 295 359 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g0987 403 MobiDBLite consensus disorder prediction 19 36 - -
Hepe06g0987 403 MobiDBLite consensus disorder prediction 1 42 - -
Hepe06g0987 403 Coils Coil 315 363 - -
Hepe06g0987 403 SUPERFAMILY Leucine zipper domain 298 354 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g0987 403 Pfam bZIP transcription factor 295 357 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe06g0987 403 Pfam Disordered region downstream of MFMR 135 262 - -
Hepe06g0987 403 PANTHER G-BOX-BINDING FACTOR 3-RELATED 23 385 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0043565(InterPro)|GO:0043565(PANTHER)
Hepe06g0987 403 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 302 317 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0987 Hepe-Chr6:57589689 Hepe10g0612 Hepe-Chr10:7535286 3.07e-06 dispersed
Hepe04g1491 Hepe-Chr4:70542033 Hepe06g0987 Hepe-Chr6:57589689 7.29e-34 transposed
Hepe05g1997 Hepe-Chr5:70427015 Hepe06g0987 Hepe-Chr6:57589689 8.70e-23 transposed
Hepe06g0987 Hepe-Chr6:57589689 Hepe06g1805 Hepe-Chr6:69145938 1.17e-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55762 PF16596 MFMR_assoc 6.80E-51 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g0987 K09060 - csv:101206627 646.351