Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1002 ATGGTTTCGAGGTCTTATTCTAATTTATTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAGAAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAGCTTGATGATGATGGCTGCAACAGTGCTGGCTCGGATGCCCCTTCGACCGTCGCGCAAGACCGGATGATCATTGTTGGGAATCAGCTCCCGATTCGGGCGCATCGAGATGAGAATGGAGATTGGGGGTTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGGCTTGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAGGAGGTTGATCCTAGGGAGCAAGATGATGTTGCACAAACTCTTTTGGATCGATTCAAGTGCGTTCCGACGTTCCTTCCTCCCGAGCTTTTTAGTAAATTTTATCATGGATTCTGTAAGCAACATTTATGGCCACTGTTTCACTATATGCTTCCTCTGTCACCGGATCTTGGTGGCCGATTTGATCGGTCTCTTTGGCAAGCGTATCTTTCGGTGAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGTCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGTGAAGCTTGGATTCTTCCTACACAGTCCATTTCCTTCGTCTGAGATTTATCGAACGCTTCCCGTAAGAGATGAACTTCTTCGGGCACTATTGAACTCTGATCTTATTGGCTTCCACACGTTTGATTATGCCAGGCACTTTTTATCTTGCTGCAGCAGAATGCTTGGTCTGTCTTATCAATCTAAGCGAGGTTACATTGGGCTTGAATACTACGGTCGTACTGTGAGCATTAAGATTCTTCCTGTCGGTATTCATATAGGTCAGCTCCAAAATGTGTTAAATCTCCCCGAGACCGCATCCAAAGTCGCAGAATTGCAAGATCGGTTCAAGGGTCAAACTGTTTTGCTTGGGGTTGATGACATGGACATATTTAAAGGGATCAGCCTGAAACTTTTGGCATTTGAACAATTGCTCCGACAACGTCCCGAGAGATGGGGTAAAGCTGTGTTAGTACAGATTGCGAACCCTGCAAGAGGCAGAGGGAAAGATGTACAGGAGGTCGTGGCTGAAACTACTGCGACGGTGAATAGGATCAATGCAACGTTCAGAAGGCCAGGATATGAGCCTGTGGTTTTGATTAACACTTCCTTGCAGTTTTACGAGCGAATCGCTTACTATGCAATTGCTGAGTGCTGCCTCGTTACTGCAGTGAGAGATGGGATGAATCTTATACCTTACGAGTATATTATATGTCGACAAGGCAACGAGAAGCTTGACGATGTTCTCGGGCTAAATCCTTCAACTGCAAAGAAGAGCATGTTAGTGTTGTCTGAGTTTATTGGTTGTTCCCCATCCCTCAGTGGAGCTATTCGGGTTAACCCGTGGAATATTGAAGCTGTCACCGAAGCGATGGATTCTGCCCTGGTAATCCCTGAGGCGGAAAAGCAATTGCGACATGAAAAGCATTATAGGTACGTTAGTACGCATGATGTTGCATACTGGGCGCGCAGCTTTTTGCAGGATCTGGGCAGGGCCTGCAGAGACCATTCAATGAGGAGATGCTGGGGTATAGGTTTCGGTTTAGGATTTCGAGTTATCTCCCTGGATCCAAATATCAGGAAGCTTTCAGTTGATCATATTGTTTCGGTTTATAAGAGAACCTGCCACCGAGCAATCTTATTAGATTATGACAGTATCATGATGCTTCCTGGCTCGATTAGCATGAATCCAACTTCAGAAGCCCTTGGAATCTTGAACAACTTGTGTAAAGATCCTAAGAATGTCGTGTTCCTTGTTAGCGGAAAGGACCGAAAAACTCTGACTGAATGGTTTTCACCGTGCGAAAAGCTTGGACTAGCTGCAGAACATGGTTTTTATCTTAGGCCAAATCAAACTGCAGATTGGGAGACATGTGTAGGTGTGACCGATTTTGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACTGAGACAACTGATGGCTCTACCATCGAAACTAAAGAGAGTGCTCTTGTTTGGAACTACATTTATGCGGATCCTGATTTCGGATCGTGCCAGGCCAAGGAACTTTTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGCATTGTAGCAGAATATCTCTTGCAAACAATGAGGGAGAGGGGAATGCTTCCCGATTTCGTTCTATGCATCGGAGACGACAGGTCGGATGAGGACATGTTCGAGGTGATAACCAGTGCAAAAGCCACCCTTCCTCCCGGTGCCGAAGTGTTTGGTTGCACCGTCGGCCAGAAACCAAGCAAGGCCAAGTATTACTTGGAAGACACACACGGAATCTTGAGAATGTTACAAGGTCTCACCCATGCATCCGAGCACGCTGCTAGAGCCGCTGCGCAGACGACGCCTCATAGAGTGGTAATTGCAGAGAGTAAATAA 2595 45.55 MVSRSYSNLLELASGGCSPTFGLGRERKRLPRVATVAGVLSELDDDGCNSAGSDAPSTVAQDRMIIVGNQLPIRAHRDENGDWGFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETASKVAELQDRFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQRPERWGKAVLVQIANPARGRGKDVQEVVAETTATVNRINATFRRPGYEPVVLINTSLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDDVLGLNPSTAKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVISLDPNIRKLSVDHIVSVYKRTCHRAILLDYDSIMMLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNQTADWETCVGVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYIYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMRERGMLPDFVLCIGDDRSDEDMFEVITSAKATLPPGAEVFGCTVGQKPSKAKYYLEDTHGILRMLQGLTHASEHAARAAAQTTPHRVVIAESK 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 57866192 57870262 + Hsped.06g10020.1 Hepe06g1002 572377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1002 864 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Hepe06g1002 864 CDD HAD_TPP 595 829 - -
Hepe06g1002 864 FunFam Alpha,alpha-trehalose-phosphate synthase 316 531 - -
Hepe06g1002 864 SUPERFAMILY HAD-like 594 839 IPR036412 -
Hepe06g1002 864 Gene3D - 594 711 IPR023214 -
Hepe06g1002 864 Gene3D - 723 855 IPR023214 -
Hepe06g1002 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Hepe06g1002 864 CDD GT20_TPS 63 546 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Hepe06g1002 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 314 - -
Hepe06g1002 864 Gene3D Glycogen Phosphorylase B; 56 314 - -
Hepe06g1002 864 Gene3D Glycogen Phosphorylase B; 315 531 - -
Hepe06g1002 864 Pfam Trehalose-phosphatase 597 829 IPR003337 GO:0005992(InterPro)
Hepe06g1002 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 27 841 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Hepe06g1002 864 NCBIfam HAD-IIB family hydrolase 596 797 IPR006379 -
Hepe06g1002 864 FunFam Trehalose-6-phosphate synthase 2 677 756 - -
Hepe06g1002 864 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 723 852 - -
Hepe06g1002 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 593 710 - -
Hepe06g1002 864 NCBIfam trehalose-phosphatase 594 840 IPR003337 GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0613 Hepe-Chr1:67450366 Hepe06g1002 Hepe-Chr6:57866192 0.0 dispersed
Hepe04g1932 Hepe-Chr4:74256909 Hepe06g1002 Hepe-Chr6:57866192 0.0 dispersed
Hepe06g1002 Hepe-Chr6:57866192 Hepe10g1655 Hepe-Chr10:53239067 0.0 dispersed
Hepe06g1002 Hepe-Chr6:57866192 Hepe02g0118 Hepe-Chr2:1363625 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1002 K16055 - csv:101207192 1667.51