Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1032 ATGGATTCACGGGAGAGGCCGATGCCCTCTGTTCATCATCCTCAGCCACAATCCACTCCACCCAACAGGATGATGGCCAACGCTTCCTATTCCACAAATTTACCCAACAACAACAATTCTTCTCCATTGATCAACCCCAATTCCGCTGCTGCTCAGATGATGTCGTCCGCATCGCGATTTCCTTTCAACTCCATGATGGTGTCCGCCTCTAAGCCGACGGAGTCTCCTAATGCGGATTCCTATGATGGATCGCAGTCCGAATTGCGTACTGGCGGCTTTAACATTGATTCCGGGAAGAAGAAGAGAGGCCGGCCCAGGAAGTATTCTCCTGATGGGAACATCGCTTTGGGCTTATCGCCAACGCCCATCACTTCTTCCGCCGCTCCCGTCGATTCCGCCGGCTTGCACTCGCCGGATCCTCGCCCGAGGAAGAACAGAGGACGGCCGCCCGGTACAGGGAAGAGACAGATGGACGCTTTGGGAACTGGCGGTGTTGGCTTTACTCCTCATGTCATTCTGGTGAAACCAGGAGAGGACATTGCCTCAAAAGTTATGGCATTTTCACAGCAGGGGCCGCGGACTGTTTGTATTCTTTCTGCCCATGGTGCTGTCTGCAATGTTACCCTTCACCAACCTGCAATGACAGCTGGTAGTGTGACATATGAGGGCCGCTATGAAATCATCTCTCTATCAGGTTCCTTCTTGATTTCTGACAGTAATGGTAATCGAAGTCGAACTGGTGGTTTAAGCGTGTCTCTAGCAAGTGCAGATGGACAAGTTCTTGGTGGAGTTACCAACATGCTAACAGCAGCATCTACAGTTCAGGTTATAGTGGGTAGCTTTCTTGTGGATGGGAAAAAGCTGGGCTCAAGTATACAGAAATCTGGGCCATCTTCTACATCACCCAATATGTTAAACTTTAGTGCACCCACGGCGGCAGGCTGTCCTTCTGAAGGCGCATCAAATAATTCATCCGATGACAATGGTGGTAGCCCCCCTATAAGCCGGGGGCCTGGAATGTACACCAATGCCAACCAACCAATTCATAATATGCAGATGTATCAATTATGGGGTAGTCGAAATCAATAA 1089 50.14 MDSRERPMPSVHHPQPQSTPPNRMMANASYSTNLPNNNNSSPLINPNSAAAQMMSSASRFPFNSMMVSASKPTESPNADSYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLSPTPITSSAAPVDSAGLHSPDPRPRKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLHQPAMTAGSVTYEGRYEIISLSGSFLISDSNGNRSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGSSIQKSGPSSTSPNMLNFSAPTAAGCPSEGASNNSSDDNGGSPPISRGPGMYTNANQPIHNMQMYQLWGSRNQ 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 58368338 58377231 + Hsped.06g10320.1 Hepe06g1032 572407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1032 362 MobiDBLite consensus disorder prediction 1 47 - -
Hepe06g1032 362 MobiDBLite consensus disorder prediction 67 92 - -
Hepe06g1032 362 MobiDBLite consensus disorder prediction 17 47 - -
Hepe06g1032 362 Pfam Plants and Prokaryotes Conserved (PCC) domain 169 281 IPR005175 -
Hepe06g1032 362 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 333 IPR039605 GO:0003680(InterPro)
Hepe06g1032 362 MobiDBLite consensus disorder prediction 67 161 - -
Hepe06g1032 362 CDD DUF296 168 281 IPR005175 -
Hepe06g1032 362 MobiDBLite consensus disorder prediction 291 345 - -
Hepe06g1032 362 SUPERFAMILY AF0104/ALDC/Ptd012-like 167 282 - -
Hepe06g1032 362 Gene3D - 169 295 - -
Hepe06g1032 362 ProSiteProfiles PPC domain profile profile. 163 303 IPR005175 -
Hepe06g1032 362 MobiDBLite consensus disorder prediction 291 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1032 Hepe-Chr6:58368338 Hepe08g1523 Hepe-Chr8:19506738 2.13e-70 dispersed
Hepe06g1032 Hepe-Chr6:58368338 Hepe06g1033 Hepe-Chr6:58384151 2.09e-15 tandem
Hepe06g1765 Hepe-Chr6:68749609 Hepe06g1032 Hepe-Chr6:58368338 1.20e-115 transposed
Hepe03g0464 Hepe-Chr3:7115765 Hepe06g1032 Hepe-Chr6:58368338 4.27e-17 wgd
Hepe05g1836 Hepe-Chr5:68663914 Hepe06g1032 Hepe-Chr6:58368338 2.96e-16 wgd
Hepe06g1032 Hepe-Chr6:58368338 Hepe06g1763 Hepe-Chr6:68737986 7.83e-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1032 - - - 0.0