Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1033 ATGATGGCTGGATTGGATTTAGGAAGTCGATATCTAACTCACCTTCAACCGCCTATCGATGATCCTGCAAATCGCGGGGCTCATTTTTCCTCCGGCGACCAAGATGACGACGAAGATCCCCACCAACTCCTCGGCGGCTCCGGCGATGTCGTCGGCCGCCGCCCCCGCGGCCGCCCACCCGGTTCCAAAAACAAGCCGAGGCCGCCGGTCATCATCACCCGAGAGAGCGCCAACACGCTTCGTGTCCACATCTTAGAGGTCGGCAGCGGCTGCGACATCTTCGATTGCGTCGCCGCCTACGCCCGCCGCCGCCAGCGCGGGATCTGTATTTTGAGTGGCAGCGGCAACGTCACAAACGTCGGCCTCCGCCAGCCATCGGCGGCCGGCGCGGTGCTGACCCTTCATGGGAGGTTTGAGATTTTGTCACTCTCTGGATCGTTTCTGCCGCCTCCTGCTCCGCCTGGCGCCACTAGTTTGACGATATTTTTGGCTGGAGGGCAGGGGCAAGTGGTCGGCGGGACGGTGGCTGGAGAATTAACCGCGGCTGGGCCGGTGATTTTGATTGCAGCTTCTTTTACTAATGTGGCGTATGAGAGATTGCCACTGGATGAGGAGGATCAGCAGCAAGCTCCGGCAACCGGCGGCGGCGGCGGCGGAGGAGGAGTGGGTAACAATAACAACAACCCATTTCAAGACCCATCAAATTCAGGACTTCCATTCTTGAATTTGCCACTTCATATGCAAAATGTTCAACTTCCACCATTCTGA 768 58.2 MMAGLDLGSRYLTHLQPPIDDPANRGAHFSSGDQDDDEDPHQLLGGSGDVVGRRPRGRPPGSKNKPRPPVIITRESANTLRVHILEVGSGCDIFDCVAAYARRRQRGICILSGSGNVTNVGLRQPSAAGAVLTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFTNVAYERLPLDEEDQQQAPATGGGGGGGGVGNNNNNPFQDPSNSGLPFLNLPLHMQNVQLPPF 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 58384151 58384918 - Hsped.06g10330.1 Hepe06g1033 572408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1033 255 MobiDBLite consensus disorder prediction 13 71 - -
Hepe06g1033 255 PIRSF ESCAROLA 9 251 IPR014476 GO:0003680(InterPro)
Hepe06g1033 255 FunFam AT-hook motif nuclear-localized protein 80 207 - -
Hepe06g1033 255 Gene3D - 80 210 - -
Hepe06g1033 255 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 242 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe06g1033 255 MobiDBLite consensus disorder prediction 207 238 - -
Hepe06g1033 255 MobiDBLite consensus disorder prediction 220 238 - -
Hepe06g1033 255 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 193 IPR005175 -
Hepe06g1033 255 ProSiteProfiles PPC domain profile profile. 77 213 IPR005175 -
Hepe06g1033 255 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 207 - -
Hepe06g1033 255 CDD DUF296 81 192 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1836 Hepe-Chr5:68663914 Hepe06g1033 Hepe-Chr6:58384151 2.33e-98 dispersed
Hepe06g1033 Hepe-Chr6:58384151 Hepe06g1763 Hepe-Chr6:68737986 8.45e-100 dispersed
Hepe06g1032 Hepe-Chr6:58368338 Hepe06g1033 Hepe-Chr6:58384151 2.09e-15 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1033 - - - 0.0