Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1044 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCCTGCCTCAAGCCGGAGACTCGCCCCGCCGCTCTTCCCGCCGACAATTCCGACCTCCTCTTCTCCGCCTCCGACCCTCTCGATGAAACCCTAGGCCACTCCTTCTGCTACGTTCGCTCTTCCAACCGCTTCCTCTCTCCCTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCCCTTCGTTTTTCCCCTCCTCACGAACCGAGGACTCGAACTGGCCCGCCGGAGACCGCCTTCAAGGCCATCTCCGGCGCCTCTGTCAGTGCCAATAGTTCTATTCCCAGATCTGTTCTTATGCTCGATGGCGTTTACGATGATGCCACTGACACTGCTCTTGGAGCTTCTTGTGGTGGCTGTGGAGTTAGAGGGAGTATTTTGAATGGCTTTGAGAGTACTTCTTCTTTTACTGCTCTTCCGCTCCAGCCGGTTCCCAGAGGTGGGACTGAACCGTTGGAGCGAGGTGGTTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCGCTGTCTGGTCCGCTTGATGCGAATGTTGATGGTGGAGGCGGCGGCGGAGGCGGCGGTGGTGGTGGCGGTGGTGGGAGAGTTCATTTCTCCGCTCCGCTTGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGGGCATTTCCGGGTTTCGGAAGGCGTTTACGAGGAACTTTTCTGATAAGCGGCCGTGGGTAGTGCCGGTTTTGAATTTCGTTGGCCGGAAGGAGAGCTCGACGGCGGGTGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCACTTGGGAAGGCTGGGGAGGATCGGGTACATGTTGTTGTATCGGAAGAACAAGGGTGGTTGTTTGTTGGGATTTATGATGGGTTTAATGGCCCTGAAGCTCCTGAATTCTTGATGGGTAATCTCTACAGAGCCGTCTACAATGAGCTTCAGGGATTGTTTTGGGAAATTGATGACAGTCAGGAGGCTGCTGCTAATATGAACCCTTCGAATGTGGCTGAAGAGACTACAGTCAGTGTGAGTGAAACTAATGCCTTCCCATCTACGAAAGCCTCTGGTCAAACGGTTGAAACTAATGGGAATGTTTCAGTAGTTGGAAATGAAGAACCAGCTGCTGATCGAGGACCGGCGAAGAGGGTTACGTTTCAATCCGAGGATGGAACGGAGACCCGTCGGAGGCGGCGCCTGTGGGAGTATTTAGCGGAGGACGATACACAGGACGGACTTGATCTTTCAGGTTCGGATAGATTTGCATTTTCGGTTGATGACGCGCTTAGTGTAAATAGTACAGGTTCAGTAGCTGGTAGAAGGTGGTTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGCCATGTTAAAACTTTGTTCCCATGGAACGGTTTGGGAGATAAAGAGAAGGTTGAGGCTGAGAATAGGGTAGAGGAGACATCTTATCGAAGTGATAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGCTGGTGTTGGGGGCATTGTCAAGGGCTCTTGAGATAACTGAATTAGAATATTTGGATATGACAGATAAGTTGCTTGATACGAATCCAGAGCTTGCTTTGATGGGTTCCTGTTTGCTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATGTGGGTGACAGCCGTGCCATTGTTGCACAGTATGAGCAACAAGAAGTTGGTCCTAGTGAAGACATGAAGGAGGAGGGCGACAAGAGAACAGGTATGGAGGGTATAATTGAGGAGTCTACAACGATTAGTGAAGGGAAAATAACTCGACCGAACCAACCTTCAGCTCAGACGACGAGATTAGCTGCATTGCAGCTATCCACCGATCATAGCACAAGCATTGAAGAGGAAGTAAGAAGAATAAAGAATGAGCACCCTGATGACAAACACTGCATTGTCAACGATAGAGTGAAGGGCCGTCTAAAGGTTACGAGGGCATTTGGTGCAGGATTTTTGAAACAGCCAAAGTTGAACGATGCATTATTGGAAATGTTTCGGAATGAGTATATTGGTACTGCACCATATTTATCATGCACGCCTTCTCTTCGTCACCATAGAATCTGCCCCACAGATCAATTCGTAGTGCTCTCATCTGATGGATTGTATCAATATCTAACCAATGAAGAAGTGGTTTCTTATGTTGAGAACTTTATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGTCGTGCAGCAAGAAAAGCAGGAATGGATTTTCATGAGTTGCTGGACATCCCACAGGGGGATCGAAGGAAGTATCATGACGACGTTACTGTTATGGTCGTTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2397 48.77 MGSGVSSLFSCLKPETRPAALPADNSDLLFSASDPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHEPRTRTGPPETAFKAISGASVSANSSIPRSVLMLDGVYDDATDTALGASCGGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGGGGGGGGGGGGGGGRVHFSAPLGGMYVKKKRKKGISGFRKAFTRNFSDKRPWVVPVLNFVGRKESSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPEAPEFLMGNLYRAVYNELQGLFWEIDDSQEAAANMNPSNVAEETTVSVSETNAFPSTKASGQTVETNGNVSVVGNEEPAADRGPAKRVTFQSEDGTETRRRRRLWEYLAEDDTQDGLDLSGSDRFAFSVDDALSVNSTGSVAGRRWLLLSKLKQGLSKHKEGHVKTLFPWNGLGDKEKVEAENRVEETSYRSDKRRKEGLIDHELVLGALSRALEITELEYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYEQQEVGPSEDMKEEGDKRTGMEGIIEESTTISEGKITRPNQPSAQTTRLAALQLSTDHSTSIEEEVRRIKNEHPDDKHCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCTPSLRHHRICPTDQFVVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKYL 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 58593479 58602874 - Hsped.06g10440.1 Hepe06g1044 572419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1044 798 MobiDBLite consensus disorder prediction 375 395 - -
Hepe06g1044 798 ProSiteProfiles PPM-type phosphatase domain profile. 259 786 IPR001932 -
Hepe06g1044 798 PANTHER PROTEIN PHOSPHATASE 2C 267 786 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe06g1044 798 Gene3D - 244 793 IPR036457 -
Hepe06g1044 798 SUPERFAMILY PP2C-like 271 787 IPR036457 -
Hepe06g1044 798 CDD PP2Cc 497 786 IPR001932 -
Hepe06g1044 798 Pfam Protein phosphatase 2C 619 749 IPR001932 -
Hepe06g1044 798 Pfam Protein phosphatase 2C 509 570 IPR001932 -
Hepe06g1044 798 SMART PP2C_4 259 784 IPR001932 -
Hepe06g1044 798 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0852 Hepe-Chr4:62793736 Hepe06g1044 Hepe-Chr6:58593479 2.95e-139 dispersed
Hepe06g1044 Hepe-Chr6:58593479 Hepe08g0790 Hepe-Chr8:7084474 4.04e-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1044 - - - 0.0