Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1102 ATGTGCCATGATAACTTCCACGTTCATTCCTTAGAAGAGGCAACTACAGCTGAAGATAGTCTCCTAATATATTGCAAACCAGTCGAACTATACAACATTCTTCATCTTCGTTCCCTTAACAATCCTTCTTTTCTTCGACGTTGTTTGCTTTACAAGTTACAAGCTAGGCGAAAAGAGAGGGTGAGCACTGGAGTTGTAATTTTCAACTATAGGGACTACAACAACATAGTACGAAAAACTGAAGTGACTGAAGACTTCTCGTGTCCATTTTGTTTGATGCTATGTGCAAGCTTTAAGGGTTTGCGCTACCACTTGAGCTCTTCCCATGATATGTTCAACTTCGAATATTGGGTGACTGAAGAATATCAGGCAGTCAATGTCTCTGTGAAAATTGATGTCTTTAGATCTGAGACTGTAGCAGATGGAGTGGACCCACATTTACAGACTTTCTTCTTCTGCACAAGACCACGAAAGCGCAAGTTGAAGAACTCTATTCAGAATGGGAAGTATGTGCAGTTCTTGGAGATGGACTCACCTAGACCTGCCACAGAAGGCATGCACAAGGGATTTATTGGGCATAACGCTGATGGTGTATCCTGTGACAAAGAGGGCAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGAAGGAGAAAATGTTGTCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCAGGTGTCTCAATGGCTATCAATCAATCTTCTACGGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCTAAAGCAAGGAAGTTAACGGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAACGGCAGTTTTATCACTCTCACAGAGTTCAGCCTATGGCACTAGATAAAGTACTATCCGACAAAGATAGTGAGGATGAAGTAGATGATGACATTGCGGATTTTGAAGACCGAAGGATGCTCGATGATTTCGTGGATGTCACCAAAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTTCCTTGGGCATGTGAAGCATTCTCAAAACTTCACGGGAAAGAGCTTGTCTCATCTCCGGCTGTCTTTTGGTGTTGGAGGTTATTCATGATCAAGCTCTGGAATCATGGTCTTCTTGATGCCTCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTCAGAGATGAGAGTTCAAATGCGACGAAAAACTGCAGAAGAGATGACGATTAG 1302 42.55 MCHDNFHVHSLEEATTAEDSLLIYCKPVELYNILHLRSLNNPSFLRRCLLYKLQARRKERVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKGLRYHLSSSHDMFNFEYWVTEEYQAVNVSVKIDVFRSETVADGVDPHLQTFFFCTRPRKRKLKNSIQNGKYVQFLEMDSPRPATEGMHKGFIGHNADGVSCDKEGSHSFPIETYLQNAQQEGENVVPECPSSMECIERVASSSNIPGVSMAINQSSTGPECYKVLSGSDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVSSPAVFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFRDESSNATKNCRRDDD 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 59598979 59623779 + Hsped.06g11020.1 Hepe06g1102 572477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1102 433 Pfam VEFS-Box of polycomb protein 282 411 IPR019135 -
Hepe06g1102 433 PANTHER POLYCOMB GROUP PROTEIN 10 60 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Hepe06g1102 433 CDD VEFS-box_EMF2-like 290 416 - -
Hepe06g1102 433 CDD ZnB-Zn_EMF2-like 12 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1102 Hepe-Chr6:59598979 Hepe07g0290 Hepe-Chr7:2935093 8.53e-132 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1102 - - - 0.0