Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1113 ATGTATATTGAGGAATTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGGAATTCTGGTGTTCTTGTTTGTAATTTGGAGAGTCAGAGCATTGTAAGGTCTGATGTGAAAAGGGTCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTACCCGACTTTGGTTTATAATGTTTTCAGGAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAAGGTCGATGAGTTTATATTGTTGGGTGCTGTTCCATTCCCTACTGATGTTCCCCGTTTAAAGGAGGTTGGTGTTCGAGGAGTGATAACACTGAATGAGCCATATGAGACTTTGGTTCCTTCAACTCTATATCGTGATCATGACATTGATCATCTGACTATTCCGACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTCATCCACAAAAATGCATCACGTGGACAGACTACGTATGTTCATTGTAAAGCTGGACGAGGGCGTAGCACAACTATTGTTATATGCTATTTGGTGCAATACAAGCAAATGACGCCGGATGAAGCTTATAGACATGTGAAGTCAATCAGGCCAAGGGTGCTTTTAGCACCATCACAGTGGCAGGCTGTCCTGGAATTCTACCACCTGATGGTGCAGAAGGATGTTTCCTTCTGCCATATTGATGATCTAGGAAAGGAAGTTTCAGGATCATCGCATGATCTTATCGCATTTGATGATAATTCTGTAGTTGTCGTAAAAGAATCCGATCTTGAAGGATATGACCAAAGTATCAGCCAAAGTGAAATGGGTGATATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCACTGACAAGAATCTCTTGTTTGTGGCTCAGCTATCGAGCAAAACACCATAGCCAGAAGATTTCAGGAGATGATCTAGGCGTCGGGAAGGGCTGTTCACTCAATGCTACTCATTTGAAAGGGTTCAGTGTGGACATCCATGTCTATTAA 1002 43.31 MYIEELKEGELQSGEEGNSGVLVCNLESQSIVRSDVKRVVVGVGARVLFYPTLVYNVFRNKLQTEFRWWDKVDEFILLGAVPFPTDVPRLKEVGVRGVITLNEPYETLVPSTLYRDHDIDHLTIPTRDYCFAPLLSDICIAVNFIHKNASRGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYRHVKSIRPRVLLAPSQWQAVLEFYHLMVQKDVSFCHIDDLGKEVSGSSHDLIAFDDNSVVVVKESDLEGYDQSISQSEMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLNATHLKGFSVDIHVY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 59793480 59797429 - Hsped.06g11130.1 Hepe06g1113 572488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1113 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 62 214 IPR029021 -
Hepe06g1113 333 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 288 - -
Hepe06g1113 333 SMART dsp_5 71 212 IPR020422 GO:0006470(InterPro)
Hepe06g1113 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311(InterPro)
Hepe06g1113 333 Gene3D Protein tyrosine phosphatase superfamily 68 218 IPR029021 -
Hepe06g1113 333 FunFam Dual specificity phosphatase domain protein 68 215 - -
Hepe06g1113 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311(InterPro)
Hepe06g1113 333 CDD PTPMT1 68 210 IPR044596 GO:0004721(InterPro)
Hepe06g1113 333 Pfam Dual specificity phosphatase, catalytic domain 108 210 IPR000340 GO:0016311(InterPro)
Hepe06g1113 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1113 Hepe-Chr6:59793480 Hepe08g2635 Hepe-Chr8:68315170 6.63e-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1113 - - - 0.0