Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1136 ATGAGGGGTATTTCCTTTCACTTTCAGGGGAAGGGGGAGTTGGAAATTTCAGCTGCTTTTTCTGCTTCTTCTTCTCCGATTTGCTACTCTGGTTTTGCAGAAAAGTGGGTTAAGAAAGGGGAAGAACAAGAACAGCAAGAACAGCAAGAACGAGAACAAGAACAAGAAGAAGAAGAAGAAGAAGGGTTTTCTTATTTTGTTTTACCCAACAACGAACCCACTTCTGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGCTTCTACTCTTTCTTCTTCCTTTGGCGGTGGTGGTGGTGGTGGGGGTGGCTGTGTTCCTTCACTTCCGCCGGAGACCCCTTCTGTTGAGCCGCTCGCCGGAGCTGCCATTTTCCCCGGTGGATTGGAGCGATGTGGGGTTGGATTGGAAGATTTGGAGAGTATGTGGTCAGAATCGGCTGGACCAGAGCAGTCGTTTCTCCGGTGGATCGCTGGAGATGTTGTTGAAGATCCCAGTATGGGGATTAAGACTCTTTTGCAAAATGGGAATATACCCTTTGATTTGGATGGCAATGCCGGTATCGGAATCGTTGATCAGGGTTCCGAATTCGACCCCGGTGCTGGTAATGTTCTTGCTAATATCAATCCTAATTTATCATTTCCTCTTGCTGCTGCTTGTACTGGGTTTTCTGATGTGAATGGTAGTGGTAATAATAATAAGGCTTTTAGTAGAGGCAGTTGTGGGAATTACAAGAGTTCTAATTTGGGGTTGAACAATCGCCATGGGAATTTCAATGTTCAGAACCCTATGTTTAATGGGTCTGTTGAGAATCTTGTTGTTCCTGTTTCTGGTATGAATATGATTTATCCTCAGCAGCTTCAGCCGTTTGAGAGCCCGGATGAGAAGCCTCACAATTTGAATGCTCAGATTATGTTGAACCAGCATCAGCACCCTCAGAATCCTAGCTTTTTTGTGCCATTGACATTTGGTCAACAGGAACAGCAGCTTCAGCCACAGCTGAAGAGGCACAATTCAAGTGGAGGGCTTGACTCGAACCCGAACCCGAACGGGCAGATCCCGAAAGTTCAGTTTATGGATCCAGGGAATGAGATTTTTCTGAGGAATCATCAGTTGCAGGTACAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCTTGGTTATCCGCCGGGTTTGCAGTTTCTTTCTCAGCAGAAGGCAATGTCGCCGAAGCCGAAAGTTGTAGGGCTTGGCGACGAAATGACGTATCACAATCCTCCCCCACAGCAACAGCATCAGCATCAGCAACATGCTTTGCTCGACCAGCTCTACAAGGCAGCAGAGCTGGTTGGGACTGGGAATTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTCCTCCTTATGAACAACCCAGTTAATCCTCCTCCACCTCGCTGCCCGACACCGTTTGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCCGAAATCTCCCCGATCATTCAGTTTGTGAATTTCACCTGCAACCAGGCACTACTTGAGGCCCTCGACGACGTTGATCGAATTCACATTGTGGATTTCGATATTGGTTTCGGAGCTCAGTGGGCTTCTTTTATGCAGGAACTGTCCTTGAGGAACCGGGGTGCACCGTCGCTCAAAATCACTGCTTTTGCCTCTCCGTCCACTCACCATCCGATTGAACTCGGGCTTATGCGCGAAAATCTCACTCAATTTGCTAATGACATTGGAATAAGTTTTGAGTTCGAAGTGGTTAACTTTGATTCTTTGAACCAGAACTCCTTTTCCTTGCCATTTTCTCGAGCAAGCGAAAATGAGGCTATTGCAGTTAACTTCCCTCTATGGTCCTCATCGAACCAACCAGCATTGCTTCCGTCTCTCCTCCGTTTCATCAAGCAACTCTCACCGAAAATTGTGGTTTCACTGGACCGAGGGTGTGATCGAAGTGACCTCCCATTTCCTCAGCATATTCTTCAGGCACTTCAGTCCTACATTAACCTCCTGGAATCTCTGGATGCTATCAATATGAATTCGGATGCTGTGAACAAGATCGAGAGGTTTCTTTTGCAACCGAGAATCGAAAGCACTGTTCTGGGGCGGCTTCGGGCACCTGAAAGAATGCCCCTTTGGAAGACACTCTTTGCCTCTGCTGGGTTTACTCCAGTAACGTTCAGCAACTTCACCGAAACTCAAGCAGAATGTGTAGCAAAGAGAACTTCCGTGAGGGGATTTCACGTCGAGAAACGCCAGGCTTCCCTAGTTTTATGCTGGCAGCGCCGGGAGCTCATCTCCGCTTCAGCTTGGAGGTGTTGA 2388 47.95 MRGISFHFQGKGELEISAAFSASSSPICYSGFAEKWVKKGEEQEQQEQQEREQEQEEEEEEGFSYFVLPNNEPTSVLHMRSPSPPTSASTLSSSFGGGGGGGGGCVPSLPPETPSVEPLAGAAIFPGGLERCGVGLEDLESMWSESAGPEQSFLRWIAGDVVEDPSMGIKTLLQNGNIPFDLDGNAGIGIVDQGSEFDPGAGNVLANINPNLSFPLAAACTGFSDVNGSGNNNKAFSRGSCGNYKSSNLGLNNRHGNFNVQNPMFNGSVENLVVPVSGMNMIYPQQLQPFESPDEKPHNLNAQIMLNQHQHPQNPSFFVPLTFGQQEQQLQPQLKRHNSSGGLDSNPNPNGQIPKVQFMDPGNEIFLRNHQLQVQQQQQQQQQQQLGYPPGLQFLSQQKAMSPKPKVVGLGDEMTYHNPPPQQQHQHQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPFDVIFKMGAYKVFSEISPIIQFVNFTCNQALLEALDDVDRIHIVDFDIGFGAQWASFMQELSLRNRGAPSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDSLNQNSFSLPFSRASENEAIAVNFPLWSSSNQPALLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHILQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPLWKTLFASAGFTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWRC 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 60381166 60384461 - Hsped.06g11360.1 Hepe06g1136 572511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1136 795 MobiDBLite consensus disorder prediction 327 357 - -
Hepe06g1136 795 MobiDBLite consensus disorder prediction 47 62 - -
Hepe06g1136 795 MobiDBLite consensus disorder prediction 74 113 - -
Hepe06g1136 795 MobiDBLite consensus disorder prediction 38 62 - -
Hepe06g1136 795 MobiDBLite consensus disorder prediction 327 353 - -
Hepe06g1136 795 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 387 793 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe06g1136 795 MobiDBLite consensus disorder prediction 74 96 - -
Hepe06g1136 795 Coils Coil 37 62 - -
Hepe06g1136 795 Pfam GRAS domain family 433 794 IPR005202 -
Hepe06g1136 795 ProSiteProfiles GRAS family profile. 423 794 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0643 Hepe-Chr3:13525600 Hepe06g1136 Hepe-Chr6:60381166 2.08e-148 dispersed
Hepe06g1136 Hepe-Chr6:60381166 Hepe07g0671 Hepe-Chr7:7768584 1.60e-31 dispersed
Hepe06g1136 Hepe-Chr6:60381166 Hepe07g0684 Hepe-Chr7:8018653 4.84e-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55779 PF03514 GRAS 1.50E-95 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1136 K27747 - csv:101218630 1271.53