Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe06g1163 ATGATACCGTTCATTAGATTTCGGAATTTCGCATACAAATTCCGAAACGAAACTCAATCAATCAGATGTTTTCATTCCGGAACGAATCCGAAGTTCAGTTCTCCGGATTCTTCTTCCTCCTCCTCCACCGTTGCTATTTTCTGGGATTTGGACAATAAACCACCGAAATCCTTACCGCCTTACGAAGCCGCTGTTAAGCTCAAGGCTGCAGCGGCTTCCTTCGGCGTCGTTCGATACATGGCGGCGTATGCGAATCGGCATACGTTTAGCTACGTGCCGCAAGTTGTTAGGGAGAAGAAACGAGAGAGGAAGATGCTTAATCAATTGGAGAGGAAGGGTGTGATTAAATCGATTGAGCCGTATCTGTGTCGTGTTTGTGGAAGGAATTTCTACGCAAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAAAAGAGGTTGATTCAGATCGAATCTGCCAAAGGTAGTAGACGAGTGAAGTTGCTCGCCAAGTATTCGATGAAATTACACAAGTACAAGAATGCTGCTAGGGATGTTTTAAGTCCAAAGGTGGGATATGGTTTAGGAGATGAGTTGAAGAGGGCTGGTTTTTTGGTGAAAACTGTGTTGGATAAGCCAGAAGCTGCTGATGTAGAATTGAGAAACGACATGGTTGAGATTATGGATAGGAGAAGAGCAGATTGTTTGGTTCTTGTATCAGATGATTCAGATTTTGTGAATGTTTTGAAGGAGGCGAAATTGAGATGTCTGAGAACAGTTGCTGTAGGGGATATTAGTGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGAAGGAGATTTTAATGGGGAAGGCTAAAAAGGAAGCTGTGACTGTTGTGGGGAAATGGAAGGATAGAGATGTTTTGAAGAGTTTGGAATGGACATACAATCCTGAATTGGAGAAGAAAGAGTGTGGATTGGATGAAGATGTTGAAGGTTCTGTTAATGGAGAACATTGTGATAATTTGCAAGATGATGACAGTGGTGCTTGGTGGGAACTCAGCTCTGATACTGAAACTGAAATTGTTTCTTCAAGATCATGTAAATGA 1092 41.85 MIPFIRFRNFAYKFRNETQSIRCFHSGTNPKFSSPDSSSSSSTVAIFWDLDNKPPKSLPPYEAAVKLKAAAASFGVVRYMAAYANRHTFSYVPQVVREKKRERKMLNQLERKGVIKSIEPYLCRVCGRNFYANEKLVNHFKQIHESEHKKRLIQIESAKGSRRVKLLAKYSMKLHKYKNAARDVLSPKVGYGLGDELKRAGFLVKTVLDKPEAADVELRNDMVEIMDRRRADCLVLVSDDSDFVNVLKEAKLRCLRTVAVGDISDGPLKRNADTGFSWKEILMGKAKKEAVTVVGKWKDRDVLKSLEWTYNPELEKKECGLDEDVEGSVNGEHCDNLQDDDSGAWWELSSDTETEIVSSRSCK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 60999919 61004326 - Hsped.06g11630.1 Hepe06g1163 572538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe06g1163 363 Coils Coil 92 112 - -
Hepe06g1163 363 Gene3D - 36 281 - -
Hepe06g1163 363 ProSitePatterns Zinc finger C2H2 type domain signature. 123 144 IPR013087 -
Hepe06g1163 363 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 21 356 - -
Hepe06g1163 363 Pfam NYN domain 195 273 IPR021139 GO:0004540(InterPro)
Hepe06g1163 363 SUPERFAMILY beta-beta-alpha zinc fingers 120 146 IPR036236 -
Hepe06g1163 363 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 149 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1786 Hepe-Chr1:82937574 Hepe06g1163 Hepe-Chr6:60999919 1.50e-65 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55782 PF01936 NYN 2.10E-09 CL0280 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe06g1163 - - - 0.0